Trematomus bernacchii (emerald rockcod): 117483398
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Entry
117483398 CDS
T09643
Symbol
lima1a
Name
(RefSeq) LIM domain and actin-binding protein 1a isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117483398 (lima1a)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117483398 (lima1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
117483398
NCBI-ProteinID:
XP_033987619
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All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MASAAPFSRRPWASQSLRVTAKELSIISARGKKNAIAERFSKYQMAAEEGNAEKKKAVTE
PLPSTLRSGNLSLLKKRWEQQQSSSLRAQPQDCNPQTLKPAPTSHIQNHAETLKTAPPSQ
DQDIDPETQLHCESSSHQLQSALPEDLIMEEKPSRESEEHQGAPVEVPECEKPSVPLNSL
KMMFEKGENLSDKGSREQPRRGSVGNTANMDQLLGDGSLAESTPLRDRMALYQAAISKQE
VTPSSVSGDQQDSFCGKQKENVPPCSLDFSLECEANGRKGFTSESNAGSTNGTPVSSNQK
DSAQPKTSKNFRLPVRETCVTCLKTVYPLERLVANQHVYHSSCFRCSHCSTKLSLLNYAS
LHNNVYCKPHFSQLFKAKGNYDEGFGHRPHKELWESKVESAETSPQPKAKTLSPEEEEEE
ERPSVEDSPLAKVNVLTATMEALGQGAGEKSDRPPEARRLKISWPPRTEQEESSGRSGAA
TEEGSPGKSVKAKWPPEEDSVPEQPKEGPSLRRTSSLKERSMPFTLAGQTPEVRKTSPPP
PPGDDGDLSPEPASMELHDGGHSPAEEVLLSSGGEEEEAENMPEQNLTREEEDTPEEEPE
EEEKMEEEEEDVMEEEMPPQKREEMISSPDGEVEASRSSQDVGFWDSEDKEAEDKEAEDK
EEEDKEEVQQQEEEEEEEGLTVEDMIKRNRYYEEEEEAEDV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgctccgttcagccgcagaccgtgggcgtcccagtcgctgagggtcacc
gccaaggagctgtccatcatctccgcccgggggaaaaagaacgccatcgcagaacgcttc
tcaaagtaccagatggcagcagaggagggaaatgcagagaagaagaaagcggtcacagaa
cctcttccctccacactgcgcagcgggaatctgagtcttttaaagaaacgctgggaacag
cagcagtcatccagcctcagagcccaacctcaggactgcaaccctcagaccctcaaacct
gcgcccacatcacacatccagaaccacgcagagaccctgaagaccgccccaccctctcag
gaccaggacatcgacccggagacgcagcttcactgtgagtccagctcccaccagctgcag
tcggctcttcctgaggatctgatcatggaggagaagcccagcagagagtcggaggagcat
cagggagcgccggttgaagtacccgaatgtgagaagcccagcgtccccctcaacagcctc
aagatgatgtttgagaagggagagaacctgagcgacaaggggtccagagagcagccgaga
agaggaagcgtcggtaacaccgccaacatggaccagctactaggagatggaagtcttgca
gagtccacgcctctccgggacaggatggctctttatcaggcggccatctccaaacaggaa
gtcacaccctcctctgtcagtggtgatcagcaggacagtttctgtggaaagcagaaggag
aacgttcctccgtgctctctggactttagtttagagtgcgaggcaaacggcaggaaaggt
tttacctccgagagcaacgcaggctccaccaacggcactcctgtatcctccaatcagaaa
gactccgctcagcccaagacctccaaaaacttccggctgcctgtgagggagacgtgtgtg
acgtgcctgaagacggtgtatcctctggagagactcgtggccaatcagcacgtttaccac
agctcctgcttccgctgctcacactgcagcaccaaactcagtttgttgaactacgcctcg
ctgcacaacaacgtctactgcaagccgcacttctcccagctcttcaaggccaaaggaaac
tacgacgagggcttcggccaccggccccacaaggagctgtgggagagcaaagtggagagc
gccgagacctctcctcagcccaaagccaagaccctgagcccggaggaggaggaggaggag
gagcgccccagcgtggaggactccccgctggctaaagtcaacgtgctgacggccaccatg
gaggctctggggcagggggcgggggagaagtccgacagaccccccgaggcccgccggctg
aagatctcctggcctcctcgcacggagcaggaggagtcgagcggccgcagtggagccgcc
acagaggaggggtccccagggaagtctgtcaaagcaaagtggcccccagaggaggattca
gttcccgagcagcccaaagagggcccttctctgcgccgcacctcctccctgaaggagcgc
agcatgcccttcactctggcaggacaaactccagaggtgaggaagacgagtcctcctcct
cctcctggcgacgacggagatctgagtcctgaacctgcaagcatggagctgcatgatgga
ggtcattcccccgctgaggaggtcctcctcagctcaggaggagaagaggaggaggctgaa
aacatgccggagcagaatctcaccagagaggaggaggacaccccggaagaagaacctgag
gaagaggagaagatggaggaagaggaggaggatgtgatggaggaggagatgccgcctcag
aaacgggaggagatgatctcgtctcctgacggcgaggtggaggccagtcgctcctcccag
gatgtcgggttctgggacagcgaggataaggaggcggaggataaggaggcggaggataag
gaggaggaggataaggaggaggtgcagcaacaggaggaagaggaggaagaggaggggctg
acggtggaggatatgatcaagagaaaccgatactacgaggaggaagaggaggcggaggat
gtataa
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