Trematomus bernacchii (emerald rockcod): 117483480
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Entry
117483480 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1.1-like
KO
K06550
L1 cell adhesion molecule
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117483480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117483480
04090 CD molecules [BR:
tben04090
]
117483480
04091 Lectins [BR:
tben04091
]
117483480
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
L1 family
117483480
CD molecules [BR:
tben04090
]
Proteins
117483480
Lectins [BR:
tben04091
]
I-type lectins (Siglecs)
117483480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
C2-set_2
Sp38
CRLF2-like_D2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
117483480
NCBI-ProteinID:
XP_033987730
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MCVSQWTGYRGPVSPALPLLLLPLLLSFFSSTPPLAQGAISIPENYQVYNMSEPPELTKL
PHSYTAFSHEDINLPCEATGNPTPTFRWVKDGEAFGSEREEFGTLKAQDEEETLDSYGGY
YRCYASNTLGTAMTQSVHLTVEPQPVLLKQQRVDKKANEGDSMILACNPPNSSTPPHIHW
MDRRMVHIKLNDRVMVGLDGNLYFSNLIKTDSRSDYICNAQYTLARTVLPLPAVHLTVMQ
SNDLVHGKKPDFFHPVGSHSSVQALRGDSVVLECLPKGLPTPKVEWKKKDGSLEETSGRV
DSDSHGRWFRFDSIEQNDDGEYECIASNNQGSVSHSFTLTVEAPPYWVKAPQSLRYAPGE
TVRLDCQAEGIPTPKISWSINGELLSDVDDDPRRSVSGGVMIMRDVVFTDTAVYQCVASN
EHGSILLNTYLYVVELPPQILTSDAKVYKFTEGGSVVMDCESFGSPRPHITWEGEDRLPL
LSDPRVALLTNGSIIVSDVSHEDSGEYSCSIKHSNISISAHLEVYNQTVILNGPQDVRVL
RGRSALLDCVFQKDPRLIKYQIVWKKAEHKMQESSPDDKHTIFDNGTLKVTNIQSDDSAR
YSCEVITALGSVTASGSITVVARPDPPEGLSLSDVADHSLTLSWNPGKTHNSPIIEFIVE
AREEQHTEHGRWRWEEWKKVPGEFNHLELTLHPYCTYRFRVIAVNEIGHSDPSHFSDHHK
TPPAVPDRNPSGVRSESTDPKTMIITWDEMDKRFHSGEGFKYHVSWRGGGXDAQWNHADV
ATPPYVINDTGTYTPFEIKVQAVNDVGGGPTPEPEIGYSGEDEPQEAPTNVSTIVTDSTV
TVKWKEAQNVRGLLLGYKIYLQRLGPEVFRVQRSLGKQHQEREDKLERARERDREVVVHG
MKTSEDVTGLRLYSRYELSVAAFNSKGEGPRSPPHHFRTPQGAPGPPASFRLESTSEKSM
ILYWSPPEETNGILTGYVVQYRKDLDSLLQMEAIKDPAVTHFELDSLDPSSHYIFNVIAK
TILEGPPITRSGATALDGVAPSHINIVPSNTSLNLSWVHGERFRNHGFIIRYRRKSPGCD
WLDSEVVNSTQGVYLLKGLLPGSEYHLMINDTQWENVTRTKGAAPSVMPGGFAARGWLIG
LIAAILLLVLILLILCLIKRSRGGKYAVKDKEDKEGDSEARPMKDETFGEYSDADEKRSE
SQPSLCGESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSNRGPAPPGHESSGPASPDNGV
PPPPIAPSMSTILDRPS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcacagtggacgggctatagggggccggtctcccccgccctccccctgctc
ctcctccccctcctcctgtccttcttctcctccacgcctcccctcgctcagggagccatc
agcatccccgaaaactatcaagtgtataacatgtcggagcctccggagctgacaaagctg
ccacactcgtacacagccttttctcacgaagacatcaatctgccctgtgaggccaccggt
aacccaactcccactttccgctgggtgaaagacggcgaggcgttcgggtcggagcgtgaa
gagttcgggacgttaaaagcccaagatgaagaagagacactcgactcgtacggaggctac
taccgctgttacgcctcaaacactctgggaaccgccatgacacaatccgtacatctcacc
gtggagcctcaaccggttcttctaaaacagcaaagagtcgataagaaagcaaacgaggga
gacagcatgatcctggcctgcaaccctccaaacagctccacccccccgcacatccactgg
atggacaggaggatggtgcacatcaagctgaacgacagagtgatggtcggcctggacggg
aacttgtacttttctaatcttattaagacagacagcagaagcgactacatctgcaacgct
cagtacaccttagccaggacggtcctccctctccctgctgtccacctcactgtcatgcag
agtaatgatcttgttcatggcaagaagcctgacttcttccatcccgtgggctcccacagc
tccgtgcaggccctcaggggcgacagcgtcgtcctcgaatgtctccccaaaggcctacca
actccaaaggtagaatggaagaagaaggatggcagcctggaggaaaccagcggcagggtg
gattcagattcacacggtcgctggtttcgcttcgacagcatcgagcagaatgatgacggg
gagtacgagtgcatcgcctccaacaaccaaggctccgtctcacactccttcaccctcact
gtggaagcccctccgtactgggtgaaggcgcctcagagtctgcgctacgctccgggggaa
acggtgcgtctggactgtcaggctgaaggcatcccgaccccaaagatcagctggagcatc
aacggagagctgctctcagatgtggatgatgaccctcgtcgcagtgtgtcggggggtgtg
atgatcatgagggacgtggtgtttacagacaccgctgtgtatcagtgtgtggcgtccaac
gaacacggctccatcctgctcaacacctacctctatgttgttgagctccctcctcagatc
ctgacctctgatgcaaaggtgtacaaattcactgagggcggatccgtcgtgatggactgt
gagtccttcggctcgccacgcccacacatcacatgggagggggaggacaggcttcctctg
ctgtcggaccctcgtgtcgctctgctcaccaacggctccatcattgtgtccgacgttagt
cacgaggacagcggagagtacagctgctccatcaaacacagcaacatctccatctctgca
cacctggaggtctacaaccaaacggtgatcctgaacgggccgcaggacgtgcgtgtgctc
agaggaaggagcgctctgctggactgtgtcttccagaaagaccctcgcctcataaagtac
cagatcgtctggaagaaggccgaacacaaaatgcaggaatcgtctccagatgacaagcac
acgatatttgataatggaaccctgaaagtcaccaacatccaatcagacgacagcgctcgt
tattcctgtgaggtcatcactgctctgggaagcgtaacagccagtggctccatcactgtc
gtggcccggccggaccctcctgaaggtctgtctctgtctgatgttgctgaccacagcctc
acactcagctggaacccaggaaaaacacacaacagccccatcatagagttcatcgtggag
gctcgtgaggagcagcacacggagcacggcaggtggaggtgggaggagtggaagaaggtg
ccgggggagttcaaccacctggagctcaccctccacccgtactgcacctaccgcttcagg
gtcatagccgtcaacgagatcggccacagcgaccccagccatttctcggaccaccacaaa
accccccctgccgtccctgacagaaacccctcaggtgtgcgcagcgagtccacagatcct
aagactatgatcatcacctgggacgagatggacaagcgcttccactccggcgaggggttc
aagtaccacgtgtcgtggcgtgggggggggnnggacgctcagtggaaccacgcagacgtt
gcgacgcctccgtacgtcatcaacgacacagggacgtacacaccgtttgagatcaaagtc
caggctgtcaacgacgtgggggggggcccgacaccggagccggagatcggatactccgga
gaggacgagccgcaggaagctccaactaatgtctccacgatagtgacggacagcaccgtc
acagtcaagtggaaagaagcccaaaatgtgagaggtctgctgctgggatacaagatctac
ctccagaggttgggtccggaggtctttcgggtccagaggtctctcgggaaacagcaccag
gagagagaggataagctggagcgagcgagggagagagaccgggaggtggtggtccacggc
atgaagacctcagaggatgtgacggggctgcggctttactcccgctacgagctgtccgtc
gctgcctttaacagcaaaggggaggggcctcgctcccccccgcaccacttccgcacccca
caaggagcgcctggtcctcctgcatcgtttaggttggagagtacttcagagaaatccatg
atcctctactggagccctccagaagaaaccaacggcatcctgacgggatacgtggtgcag
tatcggaaggatctggacagcttgctgcagatggaggccatcaaggacccggctgtgacc
cactttgagttggactctctggacccgagcagccattacatcttcaacgtgatcgctaaa
accattttagaaggaccccccatcacccggagcggggccaccgcgctggacggagttgct
ccatcacacatcaacatagttcccagcaacacgtcactcaacctgagctgggtgcacgga
gagagattcaggaaccacggcttcatcatccgataccgcaggaagagccccggctgtgat
tggttggactcggaggtggtgaactccacgcaaggtgtctatttgctgaaaggcctcctg
ccgggatctgagtaccacctcatgatcaacgacactcagtgggagaacgtgacacggacc
aaaggagcagcgccgtcggtgatgcccggtgggttcgctgctcggggttggttgatcgga
ctcatcgctgccatcctgctgctggtgctcatcctgctcatcctctgcctcatcaagcgc
agcaggggggggaaatacgcagtgaaagacaaagaggacaaggagggggactctgaggct
cggcccatgaaagacgagacgttcggagagtacagcgatgcggatgagaagcgctctgag
agccagccctctctgtgtggggagagtaagctgggcagcgacgactccctcgcagagtac
ggggacagcgtggacatccagttcaacgaggacgggtccttcatcggccagtacagcaac
cgagggcccgccccccctgggcacgagagctccggccccgcctccccggacaacggcgtc
ccgcctccccccatcgctccgtccatgtccaccatcctcgaccggcccagctag
DBGET
integrated database retrieval system
