Trematomus bernacchii (emerald rockcod): 117483512
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Entry
117483512 CDS
T09643
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117483512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117483512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117483512
Membrane trafficking [BR:
tben04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117483512
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117483512
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117483512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BAR
PH_21
PH_11
TPR_TTI1_N
ALA1
PH_8
PH_alsin
Motif
Other DBs
NCBI-GeneID:
117483512
NCBI-ProteinID:
XP_033987762
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MTVDFEECIKDSPRFRANIAEVETEVVEIEAKLDKLVKLCSGMIEAGKAYVSANKLFVNG
VRDLSQQCKKDESISECLEKCGESLQEIINYHMVLFDQAQRSVKQQLHNFVKEDVRKFKD
TKKHFDRVREDLEIAQVKNAQAPRNKPHEVEEAAGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDEINPYMKKLAAELDQLVIDSAMEKREMEHKH
ATIQQRTLMQDFSYDDSKVEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPSKSCMLQAESEKLRQSWIQAVQA
SIASAYRESPDSYYIEHLDRTASPSTSSIDSASEPRERSVRGESILQRIQLLPGNEQCCD
CGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSVIN
HIYEGSYQEQGLKKPLPSSSRQEKETWIKSKYVERKFLKKLCSTEILINGERKSERRWSV
KKCRRHNSATTVPKTRRRYRHDIGSISPSTLSSAAAKFRRESLFCPDELDSLFSYFDTGS
GPRSPAGLSSDSGLGGSTDGSSDILVFGSVVGSVTEECEVSEDSSGEAEPETSDPEDLRE
LPPGALLCKASKARNLPIMAEALAHGADVNLVNDEDEGKTPLIQAVIGGSLIACEFLLQN
AADVNQRDARGRGPLHHATYLGHTGQVCLFLKRGATQNDEDEDGQDPLSIAVQQANADIV
TLLRLARMNEEMRESEGPFGQPGDATYLDIFREFSHMASHNPEKLKRRSVHFRHSFR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaagaatgcattaaggattctccccggtttagggcaaatatcgct
gaggtggagacggaggttgtggagatcgaggcaaaactagataagctggtgaagctatgc
agtgggatgatcgaagccgggaaggcgtacgtcagcgccaacaaactcttcgttaacggc
gtccgggatttatctcaacagtgcaagaaggatgagtcgatatcggagtgcctggaaaag
tgcggcgagagcctccaggaaatcatcaactaccacatggtcctgttcgatcaggctcag
aggtctgtgaagcagcagctgcataactttgtcaaagaggatgttcgtaaattcaaggac
acgaagaagcactttgaccgcgtgcgtgaggatctggagatcgctcaggtgaagaacgct
caggcgccgaggaacaaacctcacgaggtggaggaagctgccggaacgctcagcatcacc
aggaagtgcttcagacacctcgcgctggactacgtgctgcagatcaatgtcctccaggcc
aagaagaagtttgagatcctggacgctatgctgtccttcatgcacgcgcagtactcgctg
ttccaacaaggctacaacctgctggatgagatcaacccgtacatgaagaagctggctgct
gagctggatcagctggtgattgattcagccatggagaagagggaaatggagcataaacat
gcgaccattcagcagaggactctcatgcaggacttctcctatgacgactctaaggtggag
ttcaacgtggatgcccccaacggtgtggtgatggagggctacctgttcaagagggccagc
aacgcctttaagacctggaacaggcggtggttctccatacagaacagtcagctggtctat
cagaagaagctcaaggactctctcacggtggtggtggaggacctccggctgtgctccgtg
aaaccgtgtgaggacatcgagaggaggttctgcttcgaggtcgtctccccctccaagagc
tgcatgcttcaggcagagtctgagaagttgagacagtcgtggattcaggcggttcaggcc
agcatcgcctcggcctacagagagagcccagactcttactacatagagcacctggacaga
acggcctctccgtccaccagcagcatcgattcggccagcgagcctcgggagcgcagcgtc
cgcggggagagcatcctgcagaggatccagctgctgcccggcaacgagcagtgctgcgac
tgcggccaggcggacccccgctgggcctccatcaacctgggcatcctgctgtgcatcgag
tgctccggcatccacaggagtctgggagttcactgttcgaaggttcgctctctcacactg
gactcatgggaaccagaattattaaagttaatgtgtgagcttgggaacagtgtcatcaac
cacatctacgaaggctcataccaagaacaaggtctaaagaaaccattaccgtccagttca
aggcaggagaaggagacttggatcaaatcaaagtacgtggagaggaaattcctgaagaag
ctgtgctccacagagatcctcatcaacggagagaggaagtctgagcggaggtggagcgtg
aagaagtgtcggaggcacaacagcgccaccacggttcctaaaacacggcggagataccga
cacgacataggaagcatctccccgtccaccctctcctcagccgctgctaagttcagaaga
gaatctctgttttgtcccgatgagctcgactctctcttctcatactttgacacgggatct
gggcctcgaagtcccgcaggcctcagcagtgacagcggtttgggaggaagcaccgacggc
agctcggacatcctggtgttcggatcggtggtgggcagcgtcaccgaggaatgcgaggtg
tcggaggactcgagcggggaggcggagcctgagacgtcggaccccgaggacctcagggag
ctgccccccggggcgctgctctgcaaagcctccaaagcccgaaacctgcccatcatggct
gaagcgctcgctcacggggccgacgtcaacctggtgaacgacgaagacgaagggaagacg
cccctcatccaggccgtcatcgggggttcactgatcgcctgtgagttcctgctgcagaac
gctgctgacgtcaaccagcgggacgcgagggggaggggcccgctgcaccacgccacgtat
ctgggacacacggggcaggtgtgtttattcctgaaaagaggtgcgacacagaacgatgaa
gatgaagatggccaggaccctttgagtatagctgtgcaacaagccaacgcggatatagtc
acactgctgcgtctggcccggatgaacgaggagatgcgggagtcggagggaccctttgga
cagccaggagacgccacatacctcgacatcttccgagaattttcccacatggcatcccac
aacccggagaagctgaaacgaaggagtgttcacttcaggcactccttcaggtag
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