Trematomus bernacchii (emerald rockcod): 117483517
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Entry
117483517 CDS
T09643
Symbol
apex2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117483517 (apex2)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117483517 (apex2)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117483517 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
117483517
NCBI-ProteinID:
XP_033987771
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MKIVTWNINGIRTFRGGIKKALDSLDADIVCVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPCAAEEGLTGLLTHHEGAVGCYGDQSEFCSEELQLLDNEGRTV
ITQHRVMCQDKEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVL
GDVNTSHRQIDHCDPSDIEDFVENPGRKWLNGFLHSGRQTEETNEEEPNEEPEVTSSDPV
HGGKFVDTFRHFHPTRTSAFTCWSTMTGARQTNYGTRIDYIFADCQLAKEQFVAADIMPE
VEGSDHCPVWGKLSCSLLPSSKPPPFCTCYLPEFAGKQQKLSRFFVKVDQKSIQSEHREA
LPGSQEEEERRENLKPSGAGNASGKKRLLTSDSVVPKGKKAKTCPKPQGSLLSFFKPKLP
TAAPSTEAPEKKTLGTDKVTSSQNSQKACTTSKDTSSVTSSETVPELLDDASPKLCTSME
SDKPMNLKHLTPAPNVGQSGAKKGASLGFWKSVLHGPPPPPSCKVHREPCVLRTVKKEGP
NMGKQFFVCARPQGHASNPEARCSFFAWVEKGK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacctggaacataaatggcataaggactttcagaggaggcattaaaaag
gctcttgattctctggacgcggatatagtctgtgttcaagagacaaaagtgacaagagac
ttgcttgatgaaaggactgccattgttgacggatacaactcttatttcagcttcagtcga
ggacgcagcggctattcaggggttgccacttactgtaaagacagtgccaccccatgtgct
gctgaagagggtctcaccggtctgctgacccatcatgaaggagctgttggatgttatgga
gaccagtctgagttctgcagcgaggaactgcagcttctggacaatgaaggacgaaccgtt
atcacacagcacagagtcatgtgtcaggacaaagaacaaactgtaactgtgatcaacgtg
tactgtccgcgggccgaccctgagaagccggagcgaaagcagttcaagcttcagttctac
aaactgcttcagagtcgggctgaagctatactgaaagatggcagccacgtgattgtttta
ggagatgtaaacacgtctcaccggcaaatagaccactgtgaccccagcgatattgaggat
tttgttgaaaaccctgggaggaaatggctgaatggcttcttgcacagtggcagacaaaca
gaggaaacgaatgaggaggaacccaacgaagaacctgaggtaacttcctcagatcccgtc
cacggtgggaaatttgtggatacatttcgccacttccatccgactcgcaccagcgccttc
acgtgctggtccaccatgactggagcgcggcagaccaactacggcacgcgcattgactac
atcttcgccgactgccagctggccaaagagcagtttgtggcggcggacatcatgccggag
gtggaggggtcggaccactgccctgtgtgggggaagctgagctgctccctgctgcccagc
tccaagcccccccccttctgtacatgctacctgccagagtttgcaggcaagcagcagaaa
ctgtcccgcttctttgttaaagtggaccagaaatcgattcagtccgagcacagggaggca
ttacctggatctcaggaagaggaggaaagaagggagaatttaaagccatccggagctgga
aacgcctctggtaaaaaacggttattaacatcagactctgttgtcccaaaggggaaaaag
gctaagacttgtccaaagccacagggcagcctcctctcctttttcaaacccaaacttcca
acggctgctccctctaccgaagcccctgaaaagaaaacactcggcacggacaaagtaacc
tcttcgcaaaactcccaaaaagcgtgcacaaccagcaaagacacatcctcagtcacaagc
agcgaaactgtccctgagctcctcgatgatgcttcaccaaagctctgcacctcaatggaa
agtgacaaaccgatgaatctaaaacatttaaccccagcgcccaatgtgggacagtccggt
gccaaaaaaggggcttcgttggggttctggaagtccgtgcttcatggtccacctccaccg
ccctcctgtaaggttcatagggaaccctgtgtgctgcgtacggtgaagaaggaggggccg
aacatggggaaacagttctttgtttgcgcccgtcctcagggacacgcgtccaaccccgag
gctcggtgtagtttctttgcgtgggtggagaagggaaagtaa
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