Trematomus bernacchii (emerald rockcod): 117483603
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Entry
117483603 CDS
T09643
Symbol
lbx1a
Name
(RefSeq) transcription factor LBX1a
KO
K09353
homeobox protein LBX
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117483603 (lbx1a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
117483603 (lbx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
117483603
NCBI-ProteinID:
XP_033987869
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MASKDAYKCPAGLVDRRPLDQLPPPASSNKPLTPFSIEDILNKPSARTSGAARHGEKLPI
AGNKLSCRPLLAHSSPLCALEELASKTFKGLEVSVVQAAEGRDGLTLFGQRSAPKKRRKS
RTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMK
ADVQSASVSGTVALEKLSNLAELEKCIDGVNGAGTLDPVSRLRLAATGILASRRAPLSPA
APRPGCSEDEDEEIDVDD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaggacgcctacaaatgcccagcggggctcgtcgatcggcgcccgctggac
cagctcccgccaccggccagctccaacaagccgctgacacctttcagcattgaggacatc
ctcaacaagccgtcagcgaggacgagcggagcagcccgccacggagagaagctgcctatt
gcggggaacaagctgtcctgccggccgctgctcgctcacagctccccactgtgcgcgctg
gaggagctggccagcaaaaccttcaagggcctggaggtcagcgtggtgcaggcggctgag
ggccgcgacggcctgacgctcttcggccagaggagcgccccaaagaagcggcggaagtcc
cgcacggcgtttaccaaccaccagatctacgagctggagaaacgcttcctgtaccagaag
tacctgagcccagcggaccgggaccagatcgcccagcagctcggtctgaccaacgcgcag
gtcatcacctggtttcagaaccggcgggcgaagctcaagcgggacctggaggagatgaaa
gctgatgtgcagtccgcctcggtgtccggcactgtggccctggagaaactctccaatctg
gccgagctagagaagtgcattgacggcgtaaacggcgccgggactcttgacccggtctcc
aggttacgccttgccgccaccgggatcctggcctccagaagagcgcctctctctcccgca
gcgccgcgtcccggctgctcagaggatgaagatgaagaaattgacgtggatgactga
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