Trematomus bernacchii (emerald rockcod): 117483639
Help
Entry
117483639 CDS
T09643
Symbol
eme1
Name
(RefSeq) LOW QUALITY PROTEIN: crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03440
Homologous recombination
tben03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117483639 (eme1)
03460 Fanconi anemia pathway
117483639 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117483639 (eme1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117483639 (eme1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
117483639
NCBI-ProteinID:
XP_033987914
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MREHGGCSDSSSDLDEEFPVFDFLQSGRHPHPASQSSTDNTHSGNVGTYSGAADVMMISS
DSDDDAPYVPLAQRLKQRQESVISASSSVTNGKDAEHYSPSKLGDLQLSRQNGLSKSEQP
LSFHQVRTVSPDEAAVFPQQGLPPADTKKNAAKQTLEIQSSRKEVLMEKQNREGHQRAKE
GHRQEQERQRAERKALAEAAKALRPEECIKHMVVAVDPALLQLEGGGTLLAALQALGCNC
AIEKQGIPRSVSWMRRAPCAQPEDAECVREALVVMQMTVDDFITLTHSYIQEQRHGAGSG
PTLSSWVQQHQTRHPAKTLSLVVLDLEKYFRSQKSQTKKQNGGEEGGVKKRRKNGGAQIL
PEVSRVDLEEAVVHLQLHNGVSVCFLSTWKDFSDYITMTTKAVAEAPFKQEREKTGFSFY
LESEWAGGQRVDKAGKGLLQVWRRQIQQLNRVSPDMASALLAAYPSPQLLHKAYSRCQSE
RESVSLLSELLIRRGEGVTSTTRRVGPELSRRLFLLMTSCDPENTLDSTV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagggaacatggtggctgcagtgactccagcagcgacctggatgaggagtttccggtg
tttgacttcctgcagtcgggtcgacacccccacccagcttcccagagcagcacagataac
acacactcaggcaatgtgggcacatattcaggagcggctgatgtaatgatgatcagcagc
gattctgatgacgatgcaccttacgtccctttggcacagagactcaaacagagacaggaa
agtgtgattagtgcctcctcctctgtcactaatgggaaagatgctgaacactattcgcca
tccaaactgggggatctacagctctctcgacagaatggcttgtcaaagtcagagcaaccg
ctcagcttccatcaggtgagaacagtgagcccagatgaggctgcagttttccctcagcaa
gggctgccacccgccgacaccaagaagaatgctgccaagcagacgttggagatccagagc
tccaggaaagaggttctgatggagaagcagaacagggagggccatcagagggccaaggag
gggcaccggcaggaacaggagaggcagagagccgagaggaaagctctggctgaggctgcc
aaggctctgaggccggaggagtgcatcaagcacatggtggtggctgtcgacccagctctc
ttacagctggaaggaggcgggactctgctggcggcgctgcaggctctgggctgtaactgc
gccatcgagaaacaaggcatcccacgcagtgtgagctggatgaggagggccccctgtgca
cagccagaggatgcagagtgtgtacgagaggcacttgttgtgatgcagatgaccgttgat
gacttcatcactctgacccacagctacattcaggagcagaggcatggcgcaggctccggt
cccacactgagctcctgggtgcagcagcatcagacacgtcaccctgctaagaccctcagc
ctggtggtcctcgacctggagaaatacttcagatcgcagaagtcacaaacaaagaaacag
aatggaggtgaggaggggggagtgaagaagaggaggaaaaacggaggagcccagattctc
cctgaggtgtcccgggttgacctggaggaggcagtggtgcatctccagctccacaatggt
gtctctgtctgcttcctgtctacctggaaggacttctcagattacatcaccatgacaacc
aaagctgttgcagaagccccgttcaagcaagagagggagaagacaggcttctccttctac
ctcgagagtgagtgggcgggggggcagcgggtggataaggctgggaaggggctgctgcag
gtgtggaggagacagatccagcagctaaacagagtcagtccggacatggcctccgccctc
ctggcagcgtatccctccccacagctgctccacaaggcctacagtcgatgtcagagtgag
cgtgagagtgtttctctgctgtctgagctgctgatccgcagaggagaaggcgttacctcc
acgacccgccgcgtcggccctgagctgtccagacgcctcttcctgcttatgacctcctgt
gaccccgagaacaccctggactccaccgtctga
DBGET
integrated database retrieval system
