Trematomus bernacchii (emerald rockcod): 117483820
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Entry
117483820 CDS
T09643
Name
(RefSeq) POU domain, class 6, transcription factor 1-like isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117483820
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117483820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Collagen
LRR_EndoS
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117483820
NCBI-ProteinID:
XP_033988036
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All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNSQDPPAKDAPLTVNEQVIVMSGNETIRVLEVEVEVDASLPSSLSEETSEVKFEAGGTQ
EGPQNPGGVGLVSVEVSAPAVQTMPPAVSLSLSHPQANMPITMQSCPQVLTQESLASLLT
GMMAQTGSLGQPMLIPLSMAGSIGGGGLAVLTLPSSNVASLPGFTTANTAGNLLKLPFAG
LQAATVLNSLQPQLQTSAQTMFQPQVQVTSPSPVPQVSAAQTSSSSQSNISLAALQNAGL
SINPAIISAASLGAQPQFLSSLTSTPIITSNMSNMAGITSQLITNAQGQVIGTLPLFLNP
ASLGGGAAQTLQSLQGLQGLQGLQGLQGLQGLQCLQGLQGLQGIQGLQGLQGFQGLQGLQ
GLQGLQGLQVQTVTPQLVLNSQGQIIATLGNGCAVTSAAVLPKVAATPTFTKPISQASVT
TVSQSPIVIAPQPSLMKPPLPPAVNISCGDMAKVGQLIGKPQQVISGEEGINLDEIREFA
KNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLAE
AEHWNQKGQQNLMEFVGGEPSKKRKRRTSFTPQAIEVLNSYFDKNALPTGQEITEMAREL
NYDREVVRVWFCNRRQTLKNTSKINVFQVQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccaggacccccccgccaaagatgcccccctcactgtcaatgagcaggtgata
gtgatgtcgggcaatgagacgatccgggttctggaggtggaggtggaggtggacgcgtct
ctgccctcctctctttctgaggagacgagtgaggtgaaatttgaggccggcggcacgcag
gaggggccccaaaaccctgggggagtcggtctggtttctgtggaggtttctgctcctgcc
gtccagacgatgcctcctgctgtcagtctgtctctgtctcatcctcaggccaacatgccc
atcaccatgcagagctgccctcaggtgctgacccaggagagtctggcctccctgttgacg
gggatgatggctcagacggggtctctgggccagcccatgctgatccccctcagcatggcc
ggatccatcggggggggcggtctcgctgtcctcacgctaccctcctctaacgtagcctct
ctccccggattcactacagcgaacacggccgggaacctcctcaaactgcccttcgctggc
ctccaggcagcgacggtcctgaactctctgcagccccagctccagaccagcgctcagacg
atgttccagcctcaggtccaggtgacgtctccctcacctgtccctcaggtgtctgcagct
cagacctcctcctcctcccagtccaacatctccctcgcagcgctgcagaacgcaggactc
tccatcaaccccgccatcatcagcgctgcctctctgggagctcagcctcagttcctcagc
tccctcacctccacccccatcatcaccagcaacatgtccaacatggcgggcatcaccagc
cagctgatcaccaacgctcagggacaggtcataggaaccctgccgctgtttttgaaccca
gcttctctgggtggaggggctgcacaaacgctccagagtcttcaaggtcttcaaggtctt
caaggtcttcaaggtcttcaaggtcttcaaggtcttcaatgtcttcaaggtcttcaaggt
cttcaaggtatccaaggactccagggtctccagggtttccagggtctccagggtctccag
ggtcttcagggtctccagggtctccaggtccagaccgtgaccccccagctggttctgaac
tctcagggtcagatcatcgccacgctgggaaacggatgtgctgtgacgtcggctgcagtt
ctgcccaaagtcgctgctactccaacattcaccaaacccatctcacaggcttcagtaacg
accgtcagtcagtccccgatcgtcatcgccccgcagccgtccctcatgaagcccccgctg
ccccccgcggtgaacatcagctgtggagacatggctaaagtgggccagctcatcggcaag
ccgcaacaggtcatcagcggcgaggaggggataaatctggacgagatccgagagttcgcc
aaaaacttcaagatccgccggctgtctctcggtctcacgcagacgcaagtaggccaggcg
ctcaccgccaccgagggcccggcgtacagccagtccgccatctgcaggtttgaaaagctg
gacatcacccctaagagcgcccagaagctgaagccggttctggagaagtggctggccgag
gcggagcactggaaccagaagggacagcagaacctcatggagttcgtcggcggagaaccg
tccaaaaaacgaaagcgacgcacgagcttcacgccgcaggccatcgaagtcctgaactca
tactttgacaagaacgcgctgccgacgggacaagagatcacggaaatggctcgagagctg
aactacgatcgagaggtggtgagagtttggttctgcaacaggagacaaacgctgaagaac
acgagcaaaatcaacgtcttccaggtccagtag
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