Trematomus bernacchii (emerald rockcod): 117483953
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Entry
117483953 CDS
T09643
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a
KO
K05719
integrin beta 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03271
Virion - Rotavirus
tben04145
Phagosome
tben04510
Focal adhesion
tben04512
ECM-receptor interaction
tben04514
Cell adhesion molecules
tben04530
Tight junction
tben04810
Regulation of actin cytoskeleton
tben04820
Cytoskeleton in muscle cells
tben05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117483953 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117483953 (itgb1a)
04514 Cell adhesion molecules
117483953 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117483953 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117483953 (itgb1a)
04530 Tight junction
117483953 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117483953 (itgb1a)
04810 Regulation of actin cytoskeleton
117483953 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117483953 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117483953 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117483953 (itgb1a)
04515 Cell adhesion molecules [BR:
tben04515
]
117483953 (itgb1a)
04090 CD molecules [BR:
tben04090
]
117483953 (itgb1a)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117483953 (itgb1a)
Exosome [BR:
tben04147
]
Exosomal proteins
Proteins found in most exosomes
117483953 (itgb1a)
Cell adhesion molecules [BR:
tben04515
]
Integrins
Integrin beta subunits
117483953 (itgb1a)
CD molecules [BR:
tben04090
]
Proteins
117483953 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117483953
NCBI-ProteinID:
XP_033988203
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MDLKLLLVSILFGVFCFSNAQKEGNECINANAKYCGECIQAGAKCGWCKDPEFLKQGETV
STRCDELQSLIKRGCDDDMIENPRGDQKILKNKAVTNRGRGEGKQKSEARLKLKPEEITQ
IQPQKLSLTLRSGEPQSFDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEM
SKITSDFRIGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSDGKKFN
TLVGKQHISGNLDSPEGGFDAIMQVAVCGDHIGWRNVTRLLVFSTDAGFHFAGDGKLGGI
VLPNDGKCHLENNIYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIP
KSAVGTLSANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSHCKNGVVSEGESGR
KCSNISIGDQVMFSIIVTSKGCPKQGKPETIKIKPLGFTEEVEITLNFICECECNQDGIK
NSELCHFGNGTYECGACKCNEGRVGRQCECSSNDVATEDMDRTCRKDNGTDICSNNGDCV
CGTCECKKRDNPEERYSGQYCECDNFNCDRSGNKLCGGHGRCECRVCVCDPMWTGSACDC
SLDNSTCMASNQQLCNGRGTCECGTCKCTDPKFQGPTCETCPTCPGVCTEHKECVQCRAF
GTGEKKETCERDCSYFNLIKVKDRDKLPQPNDATYPVMHCKERDANDCWFYYTYAVNNNT
QKEVHVVDILDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKM
NAKWDTGENPIYKSAVTTVVNPKYEGK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctgctcttggtatccatattgtttggagtcttttgtttcagtaatgct
cagaaagaggggaacgagtgcatcaatgccaacgccaaatactgcggggagtgcatccag
gctggagccaaatgtggctggtgtaaagacccggagttcctgaaacagggtgagaccgtg
tcgacgcgctgtgacgagctgcagtctctgataaaaaggggctgtgatgatgacatgatc
gagaaccctcgcggggatcagaagatcctgaagaacaaagcggtgacaaaccgcggcagg
ggagaagggaaacaaaagtcagaagccagactgaaactgaagccagaggagatcactcaa
atccagcctcagaaactcagcctgaccctccgatctggtgagccccagtcctttgacttg
aagttcaaacgagcggaggattatcccatcgacctgtactacttgatggacctgtcgtac
tccatgaaggacgatctggagaacgtcaagaacctgggaaccagtctaatgctggagatg
tcaaagatcacctcggacttcaggataggtttcggttcctttgtggagaagacagtcatg
ccgtacatcagcaccaccccggccaagctgctgaacccatgcacaggagaccagaactgc
accagcccgttcagctacaagaacgtcttgaagctcaccagcgacggcaagaagttcaac
accctggtgggcaagcagcacatctctggaaacctggactctcccgagggggggttcgat
gccatcatgcaggttgctgtgtgtggggaccacattgggtggaggaatgtgactcgtctg
ctggtgttctccaccgacgctggcttccactttgctggcgatggaaaactgggtggcatc
gttctgcccaacgatgggaaatgtcacttggagaataatatttataccatgagccactac
tatgactatccctccattgctcacctggttcagaagctgagcgacaacaacattcagacc
atcttcgcagtcacagaagagttccagcctgtttacaaagagctgaaaaatctgattcct
aaatctgcagtggggactttatctgccaactccagcaatgtcatcaaccttattatagac
gcctacaattcactctcctcagaggtcattctggagaacagcaagcttccagagggagtg
accatagcttacacatcgcactgtaagaacggagtggttagtgagggggaaagtggacgg
aagtgctccaacatctccatcggagatcaggtcatgtttagcatcattgtgacatctaag
ggctgtcccaagcaaggcaagcctgaaaccatcaagatcaagcccctgggattcacagag
gaggtggagataaccctcaacttcatctgtgagtgtgaatgcaaccaggacggcatcaag
aacagtgaactctgccacttcggtaacggcacctacgagtgtggagcctgcaagtgtaat
gaaggacgagtgggcagacagtgtgagtgcagcagcaacgatgtggccacagaggacatg
gaccggacctgcaggaaagacaacggcaccgacatctgcagcaacaacggagactgtgtg
tgcggcacgtgtgagtgcaagaagagagataaccccgaggagaggtacagcggccagtac
tgcgagtgtgacaacttcaactgtgaccgctctggaaacaaactgtgtggagggcatgga
cgctgtgagtgcagagtgtgtgtctgtgaccccatgtggaccggaagtgcctgtgattgt
tctctggacaacagcacgtgtatggccagcaaccagcaactctgtaacggcagaggaacg
tgtgaatgtggcacctgcaagtgtactgatcccaaattccagggtcccacctgtgagact
tgtcccacctgtccaggggtctgcactgaacacaaggagtgcgtccagtgccgggcgttt
ggcacgggtgagaagaaggaaacatgtgagagagactgcagctacttcaacctgatcaag
gtgaaggaccgggacaagctgccccagcccaacgacgccacctaccccgtgatgcactgc
aaggagagagacgccaacgactgctggttctactacacctacgccgtcaacaacaacact
cagaaggaggtgcatgtggtggacatactcgactgccccgccgggcctgacattatcccc
atcgtggcaggcgtggtcgccggcatcgtcctgattggcttagccctgctgctcatctgg
aagctgctcatgatcatccacgacaggagagagttcgccaagttcgagaaggagaagatg
aacgccaaatgggatacgggtgaaaatcccatctacaaaagtgctgtcacgactgtggtc
aatccaaaatatgaaggaaaataa
DBGET
integrated database retrieval system
