Trematomus bernacchii (emerald rockcod): 117484103
Help
Entry
117484103 CDS
T09643
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117484103 (dcaf11)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117484103 (dcaf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_LRRK2
PROPPIN
Beta-prop_RIG_1st
CxC5
Motif
Other DBs
NCBI-GeneID:
117484103
NCBI-ProteinID:
XP_033988444
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MGSQSSSGMSGGRGSSSGNPAEQSDAAEPNQSSSSSSSSSSRGRRTADRQQGDRPAASEE
DVDLAEVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWEGRLGDRYNPPVDTQ
PDTHEVDQSEIRTQILLATGSSMLKNRHSFTHMLTEREQGRCRGSSFSHGECSRIRTHFL
PNYVSHKDTYQQKAFCGVYSEDGNMFLSACQDQNIRLYDTSRGRFHLRRTVKARDVGWSV
LDVCFTPDSQNVLYSSWSDYIHLCSIDGDSENHTALDLNPDERRFCVFSLAASTDGNEIL
GGANDGCLYVFDLEQNKRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLR
EDRPQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDIRKFSPKEGLAASRLAVT
QQNWDYRWQQVPQRALKRHKLTGDTSVMTYRGHGVLHTLVRCRFSPEFTTGQRFIYSGCS
TGKIIIYDVLTGSVVSRLSGHEACVRDVSWHPYEDNIISSSWDGAVRMWEHRETHPLEEE
RERERDCPTTDKNL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtccagttctgggatgtctggaggaaggggctcttccagtggcaaccca
gctgagcagtcagacgcagcagaaccgaaccagagcagcagcagcagcagcagcagcagt
agccggggccgcaggacggccgacaggcagcaaggagaccgaccggcagcttcagaggag
gacgttgacttagctgaagtgctggcttacctactgagaaggggccaggtccgactggtc
cacggcagcggggccacaggcctgcagctggtccagtcttactctgactctgacgaggac
agcgatggagcctgggaagggcggctgggcgaccgctacaaccccccagtggacacccaa
ccagacacgcatgaagtggaccagagtgagatccgaactcagatcctgctggccaccggc
tcctctatgctgaaaaaccgacacagtttcacccacatgctaacagagagggaacaaggc
agatgtagaggctccagtttttcccacggagagtgcagtcgtatccgaacacattttctg
ccaaactatgtatcccacaaggatacgtaccagcagaaagccttctgtggagtgtacagc
gaggatggcaacatgttcctctctgcctgccaagaccagaacatccgcctgtacgacacc
agccggggacgctttcacctacgacggacagtgaaggctcgggatgtggggtggagcgtg
ctggacgtctgcttcacccctgactctcagaatgtgctctactccagctggtctgactac
attcatttgtgcagtatagatggagacagtgaaaaccacaccgccctggacctcaatcca
gatgagaggaggttctgtgtgttctcactggctgcgtccacagatggcaacgagatcctg
ggaggagcgaacgacggctgcctttacgtttttgatcttgagcagaataaacgaacgttg
aagattgatgcccacgaggacgacgtgaatgcggtggcgttcgccgacagctcgtcccag
ctgctcttctctggcagcgacgacgcgctgtgcaaggtgtgggacagacggacactgcgg
gaggacagaccgcagcctgtcggacagctggccggacaccgagacggcatcaccttcatt
cacagcaagggagacgcacgctatctgatcagcaactccaaggaccagtccatcaagctc
tgggacatcaggaagttttcccccaaagaggggctggcagcttcccgtctggctgtcacg
caacaaaactgggattaccgctggcagcaggttccccagagagccctgaagagacacaag
ctgacaggcgacacctcggtgatgacgtaccgcggtcacggcgttctgcacaccctcgtc
cgctgccgtttctctccagagttcaccaccgggcagaggttcatctactctggctgctcc
actggcaaaatcatcatttatgacgttctgacgggcagcgtggtctccagactgtcgggc
catgaagcgtgtgtgagggacgtcagctggcacccgtacgaggacaacatcatcagcagc
tcttgggacggagcggtgcgaatgtgggagcacagagagacccatccgctagaggaggag
agagagcgggagagagactgtccgacgacggacaaaaacctttaa
DBGET
integrated database retrieval system
