Trematomus bernacchii (emerald rockcod): 117484260
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Entry
117484260 CDS
T09643
Symbol
pop4
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease P protein subunit p29
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117484260 (pop4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117484260 (pop4)
03016 Transfer RNA biogenesis [BR:
tben03016
]
117484260 (pop4)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117484260 (pop4)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
117484260 (pop4)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
117484260 (pop4)
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
117484260 (pop4)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
117484260 (pop4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
Motif
Other DBs
NCBI-GeneID:
117484260
NCBI-ProteinID:
XP_033988623
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MEEALVRATIPQDLEKLLGVESRPHPKAFTDAFLKNSLPQTTRCDVNNLLTHKALILGYS
RPKKDKRKSKKTKGLNARQKRAMKVFQLKPEHQRYELFLPLHDLWRQYVYRPCGSGLKPT
SNPQFVQQKLLKADFHGAIVTVVRSKCPSYVGTTGIIVQXFKHVFKIITREDKLKVIPKR
NSVFSVEINGFVSHIYGSKFEQRASERSAXKFKVRGTIDL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctcttgttcgagccaccatccctcaggatctggagaagcttctcggtgtg
gagtctcgaccccaccctaaagccttcaccgatgccttcctgaagaacagcctcccgcag
accacacgctgcgatgtgaacaacctgctgacccacaaggctctgatcctgggctacagc
aggcccaagaaggacaagaggaagagcaagaaaaccaagggactgaacgcccggcagaag
agggccatgaaggtcttccagctcaaacctgagcaccagagatacgagctcttcctgcct
ctgcatgacctctggagacagtacgtttatcgaccatgtggcagcgggctgaagccaaca
agcaatccacagtttgtgcagcagaagctcctgaaggctgacttccacggtgccatcgtc
acagtggtgcgctctaaatgcccgtcgtatgtagggactaccgggatcatcgtccaanga
ttcaaacacgtcttcaagatcatcaccagagaagacaaactgaaagtgatccccaagagg
aacagcgtgttctcagtggagatcaacggcttcgtgtcccacatctacgggagcaagttt
gagcagcgagccagtgaacgctccgccnagaagtttaaagtgagaggaaccatcgacctg
tga
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