Trematomus bernacchii (emerald rockcod): 117484275
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Entry
117484275 CDS
T09643
Name
(RefSeq) COUP transcription factor 2-like
KO
K08548
COUP transcription factor 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117484275
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117484275
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
117484275
Nuclear receptors [BR:
tben03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
117484275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
New_glue
DUF8512
Motif
Other DBs
NCBI-GeneID:
117484275
NCBI-ProteinID:
XP_033988639
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MAMVAWRNTEGVGDSQGTLSSQVSQVAPLSLPGELSGHMNPASSLEIPQAAAAHQGAPPP
NPSSTTTTTTTNNNNTSSSSSSSSSMDKQQNQQIECIVCGDKSSGKHYGQFTCEGCKSFF
KRSVRRNLSYTCRANRNCPVDQHHRNQCQYCRLKKCLKVGMRREAVQRGRLPTQSYHGQF
ALTNGDPLQCHSYLSGYISLLLRAEPYPTSRFGSQCLQSNNIMGIENICELAARMLFSAV
EWARNIPFFPDLQVTDQVALLRLTWSELFVLNAAQCSMPVHVAPLLAAAGLHASPMSADR
VVAFMDHIRVFQEQVEKLKVLHVDSAEYSCIKAIVLFTTDACGLSDVGHVEGLQEKSQCA
LEEYVRSQYPNQPNRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLTGS
SFNWPYMPIQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggcgtggagaaacaccgagggcgtcggggactctcaggggaccctctcc
tcccaggtgtcccaggttgcacctctgtctctgcccggggagctttcgggacacatgaac
ccggcgtcttctctggaaataccccaggcagcagcagcacaccagggcgcaccgccgccc
aatccgtccagcaccactactaccactaccaccaacaacaacaacacatcctcttcctct
tcttcctcctcgtccatggacaaacagcagaaccagcagatcgaatgcatcgtgtgtggg
gataaatccagcgggaagcactacggacagttcacatgtgaaggatgtaagagcttcttt
aaacgcagcgtcaggaggaacctgtcatacacctgcagggccaacaggaactgtcccgtg
gaccagcaccaccgtaaccagtgccagtactgtcgcctcaagaaatgcctcaaagtcggc
atgaggagggaagctgtgcagagaggcagacttcccacccagtcttaccacggccagttt
gctctgacaaacggagaccctctgcagtgtcactcctatctatcgggatacatctctctc
ctgctgcgggccgagccctacccgacctccaggttcggctctcagtgcctgcagagcaac
aacatcatgggcatcgagaacatctgtgagctggcggccaggatgctcttcagcgccgtg
gagtgggcccgcaacatccctttcttcccggacctgcaggtgacggatcaggtcgctttg
ctccgcctgacatggagcgaactgttcgtgctgaacgccgctcagtgctccatgcccgtc
cacgtcgccccgctgctggccgccgcaggcctccacgcctccccgatgtctgcggaccgg
gtggttgccttcatggaccacatccgggtcttccaggagcaggtggagaagctcaaggtg
ctgcacgtggactccgcagagtacagctgcatcaaggccatcgtgctgttcacaacagat
gcttgtggtctgtcggacgtggggcatgtggagggtctgcaggagaaatcccagtgtgct
ttagaggagtacgtgaggagccagtaccccaaccagcctaacaggtttgggaagctgctg
ctccgcttgccgtccctccgcaccgtctcttcttctgtcatagagcagcttttcttcgtg
cgactggtggggaaaacacccatagaaacactgataagggacatgctgctgaccgggagc
agcttcaactggccttacatgcctattcaatag
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