Trematomus bernacchii (emerald rockcod): 117484307
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Entry
117484307 CDS
T09643
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117484307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117484307
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117484307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117484307
NCBI-ProteinID:
XP_033988674
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MITIKMSDGQPADTAEPNTSPEEQEEGGGNSLDWLLKTNSSERIPAPMDTNVSITRQSTP
GIDSFYSKAFSREKVFEAASTGNTSQLGGLLDYLRVHDKKLTSPEFTDETNGKTALLKAL
LNLKDGRNDTVEVLLDIAEKTSDLENLINASYKDPCYNGQTALHIAIERRSFDHVTLLVQ
KGADVQAKANGKFFQRHAGLGFYFGELPLSLAACTNQPSTVSFLMENSCRRADSTDRDSK
GNTVLHALAVIADNTTENTEMIAKMYDQILTQQNKLEKKVQLETIENNQGLTPLKLAAKL
GKIGLFRHLLQREFEGEEMRPLSRKFTEWVYGPVHSSLYDMSSIDTNEHNSVLELIVFGS
EIPNRPEMLQIEPLRSLLEYKWDRFASKLFLINFLAYLIYLTIFTTVAVYRKEGQPPFPV
GADLLDILRSVGEILSVLGAGWFFYKSITIFKRNPPTFKALYTDGFCDILFFLQATLLLL
CPALYLSGRREYVGLLVLSLALAWINVLYYSRGSKQMGMYSVMIQRMILGDLLHFLCVYS
VMLFGFSAAIVALMDDSPPAHKNNPNTAAHGRGFGVEPFKCEKPSYNDISFTTLELFKFT
IGMGDLEFTDLVQYKEVFYMLLILYIILTYILLLNMLIALMGNTVERISEESENIWNLQR
AFTILDMERTLPRCLREKLLCGVSKVVCLKGSRDESRRFFRVEEMNWRQWRTDVGHIQEE
DPGDRMMKPQPPEQTPGNRWNLSPLLERLRGRRRHPQPSITSRSFQPGLPF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgattaccataaagatgagcgatggacagccagcggacacagcagagccaaacaccagc
ccggaggagcaggaggagggggggggcaacagtctggactggctcctgaaaacaaacagc
tcagagaggattcctgctcctatggacaccaacgtctccataactagacagagtactcca
ggtattgacagcttctacagtaaagccttcagcagggagaaagtgtttgaagcagcctcc
acaggaaacacctctcagctgggcgggctgctcgactacctgagagttcatgataagaag
ctcacgagcccagaattcacagatgagacaaatgggaaaacggcgctgctgaaggctctg
ctgaacctgaaagatggcaggaatgacacagtggaagtcctcctggacatagctgagaaa
acttcagatttagaaaatctaatcaacgcatcgtacaaagacccgtgctacaatggtcag
acagccttgcacatcgccatagagagaaggagctttgaccatgtgactctgctggtgcag
aaaggagcagatgtgcaagccaaagccaacgggaagttcttccagcgtcatgcaggactg
ggcttttattttggagagctccccctctccctggccgcctgcaccaaccagcccagcacc
gtgtccttcctcatggagaactcctgcagaagagccgactccaccgacagagactcgaaa
ggaaacaccgtcttacacgccttggcagtcatagcagacaacacgacagaaaatacagaa
atgattgccaagatgtatgaccagatccttactcagcaaaacaagcttgagaagaaagtc
cagttggaaacgatagaaaacaatcagggactgacccccctgaagttagcagctaaactt
ggaaaaatcgggctgttcaggcacctgttacagcgggagtttgagggagaggagatgagg
ccgctctccaggaagttcactgaatgggtctatggtccagtgcactcctctctgtacgac
atgagctccatcgacaccaacgaacacaactctgtgctggagctgatcgtctttgggagt
gaaataccgaatcgtccggagatgttgcagatcgagcctctgcgcagtcttctcgagtat
aagtgggacaggtttgcttccaaactgttcttgattaatttcttggcgtacctgatatac
ctcaccatcttcaccactgtggctgtctacagaaaggaaggacagcccccgtttcccgtt
ggagccgacctgctggacatcctgcgcagcgtcggagagatcctcagtgtcctcggagca
ggctggttcttctataagtcgataactattttcaagaggaacccccccaccttcaaggct
ctctacacagatgggttctgtgacatcctgttcttcctgcaggcgaccctcctcctgctc
tgccccgctctctacctcagtgggcggagggagtacgttggtctgctggtgctctctctg
gctctggcctggatcaacgtcctgtactactcaagaggctccaaacagatggggatgtac
agtgtcatgatacaaagaatgatcctgggtgacctgctgcactttctatgtgtctatagt
gtcatgctttttggattttctgctgctattgttgctctcatggacgactcccctccagct
cataaaaacaaccccaacacggcggctcatgggaggggcttcggtgtggagccgttcaag
tgcgagaagccgagttacaatgacatcagtttcactactctggaactgttcaagttcacg
attgggatgggagacctggagttcaccgacctcgttcaatacaaggaggtgttctacatg
ttgctcatcctgtacatcatcctcacctacatcctgctgctcaacatgctcatcgctctg
atgggcaacacagtggaaagaatctcagaagaaagtgaaaacatctggaacctgcagaga
gctttcacaattttggacatggagaggactctgccgaggtgcctgagggagaagctgctc
tgcggggtgtccaaggtggtgtgcttgaaaggctcgcgggacgagagtcgcagattcttc
agggtggaagaaatgaattggagacagtggaggacagatgttggtcatatccaggaggaa
gaccctggggacaggatgatgaagccacagccccccgagcagacccctgggaaccggtgg
aacctcagtccgctcctggagaggctgcgtggcagacggcgccacccgcagccgagcatc
acctccagatcctttcaaccagggctaccattctga
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