Trematomus bernacchii (emerald rockcod): 117484309
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Entry
117484309 CDS
T09643
Symbol
cacna1g
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117484309 (cacna1g)
04020 Calcium signaling pathway
117484309 (cacna1g)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117484309 (cacna1g)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117484309 (cacna1g)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
GRP
Motif
Other DBs
NCBI-GeneID:
117484309
NCBI-ProteinID:
XP_033988678
LinkDB
All DBs
Position
Unknown
AA seq
2052 aa
AA seq
DB search
MLVILLNCVTLGMFHPCEDIVCSSDRCHILEKFDDFIFAFFAIEMVIKMLALGIFGKKCY
LGDTWNRLDFFIVLAGMLEYSLDLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGNFSIPVTMELEKYYHTENDDENP
FICSMPRENGMRDCGSVPKLYEEGGLQCNLDMLSHNSTDNTTCVNWNQYYTNCSAGSINP
FKGAINFDNICYAWIAIFQVITLEGWVDIMYFVMDAHSFYNFIYFILLIIIGSFFMINLC
LVVIATQFSETKQRESQLMKEQRIRFLSNASTLGSLQEPGSCYEELLNYLVHMIRKGARQ
TAHIIRHLARRAGVNIAASPQETESQRSKRSRRKPSRQGSVTVHHMASNQHHLHHHHHHH
YHLGNGSMRGIRCVEGRDVEAHNNNGGTLVATAGHLALPPSVTTATSDTNLSTLSNPASD
LSSVISVFHAETLRCTPSPTSHSFPIATAPMSKSMKRNSVPFAGPAPKNYPTLQARALAE
SRRASAAAGTLTNISFNLNIPPVPQETRPSSLVDTHTPTAQLSGQLSVCDLSAVDTVALT
FDPESCPYCAKALANESEGGNGDSDSEGIYEFTQDLHHRDRRDSRRPKKKQHGLCRTAGK
VVRFWRLVCDTFRKIVDSKYFGRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTS
LFALEMLLKVLVYGPFGYIKNPYNIFDGIIVVISVWEIVGQQGGGLSVLRTFRLMRVLKL
VRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGSEDLANKDTMPD
RKNFDSLLWAIVTVFQILTQEDWNKVLYNGMYSTTPVAALYFIALMTFGNYVLFNLLVAI
LVEGFQTEGEDSKPPSEIGSCARSMEDVNGSKKDLSASAVVPVNGHVDLKTSLTPPVITH
TAATPMAVLKLPVGGDPILGFESRRGSNVSMEPACYDKSPTSSSSPAPIGWTSRRSSWNS
LSRAPSLKKKQQQSGERRSLLSGEGGSSSEEGEDGGGGGGGGGGGGGGGGLMEEDNASLV
RTDSMSQKAPRHRRMESLETRSSMELPPDVLLQVPNLHRSASMLSSRPPSLGHLRTPEHS
DCNGKGSPASLGPTHVSLEDNTEDENAEEEANLSLVSRLFLWLEKKQPDWCRQRDTWSMY
LFPPESRFRIVCTRIITHKMFDHIVLLIIFLNCITIAMERPYISTVERIFLKLTNYIFTA
IFVAEMFIKIVSLGWCFGEKSYLRSSWNLLDGMLVMISVIDILVSLLSNSGTKILGMLRV
LRLLRTLRPLRVISRAPGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFF
ICQGEDIGNVTNKSDCLQANKKWVRHKYNFDNLGQALMSLFVLASKDGWVDIMYYGLDAV
GVDQQPVMNYNPWMLLYFISFLLIVAFFVLNMFVGVVVENFHKCRRHQEAEEAKRREEKR
LKRMEKKRRKAQSKPYYSDYSPTRLVIHKLCTSTYLDLFISIIIGLNVITMSMEHYQQPK
ELEQALTICNYIFTLIFVLEAVFKLVAFGFRRFFKDKWNQLDLAIVLLSIMGITLEEIDG
NTLPINPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFA
ALGVELFGDLICDELHPCEGLGRYATFKNFGMAFLLLFRVSTGDNWNGIMKDTLRDCGQD
SITTCYNTVVSPIYFVSFVLTAQFVLVNVVIAVLMKHLEESNKEAKEEAELEAELELERQ
LMGGNMEGRSPQHNPLILGMDRSSAGGSPWRSGGGGGGGEGGGGGGDMESPTADIPRDSV
NIRADSPSCLEPPLEGSAEMELSLMDNLSGSICHFYALPPQPREHSTDKKEEQLDPEQPL
EENLLSVRKPAVVRTHSLPNDSYMFENTAPPDQIIAQDQGPEHTGGPHRNQSGTERAPEA
RLLQPEDLSQLRVPADFFRPISPNSLSDSECIPRLPPPRRTHTLSRTLRRQLSWPQKKPD
PELLHKHRNSCF
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgatcctgctgaactgcgtgactctcggcatgtttcatccctgcgaggacatc
gtctgcagctccgacaggtgccacatcctggagaaattcgacgacttcatcttcgcgttc
ttcgccatcgagatggtgatcaagatgttggctctggggatctttggcaagaagtgttac
ctcggagacacgtggaaccgcttggacttcttcatcgtattggctgggatgctggaatac
tcgctcgacctgcagaacgtcagcttttcggcagtgaggacggttcgcgtgctgagacct
ctgagagccatcaacagagtgccaagtatgcggatcctggtgactctgcttctggacacg
ctgcccatgctggggaacgttctgctgctctgcttcttcgtcttcttcatcttcggcatc
gtgggcgtgcagctgtgggccggcctgctcagaaaccgctgcttcctgggaaacttctcc
atccccgtgactatggagctggagaaatattaccacacggagaacgacgacgagaacccg
tttatctgctcgatgccgcgggagaacggcatgagggactgcggctcggtgcccaaactg
tacgaggagggggggctgcagtgcaacctggacatgctgtcccacaacagcacggacaac
accacctgcgtgaactggaaccagtactacaccaactgctccgccggctccatcaacccc
ttcaagggagccatcaacttcgacaacatctgctacgcttggatcgccatcttccaggtg
atcactctggagggctgggtggacatcatgtactttgtgatggacgctcactccttctac
aacttcatctacttcatcctcctcatcatcatcggctcgttcttcatgatcaacctgtgc
ctcgtggtcatcgccactcagttttccgagaccaagcagagggagagtcagctgatgaag
gagcagcgaattcgcttcctgtccaacgccagcaccctcggctctctacaggaaccgggg
tcctgctacgaggagctgctcaactacctggtgcacatgatccgaaagggagcgagacaa
acggcgcatatcatccgtcacctcgctcgacgtgccggggttaatatcgccgcctcgccc
caagaaacagagtcccaacgcagcaagagaagtagaagaaaaccctccaggcaaggatcg
gttaccgttcatcacatggcgtccaatcagcaccacctacaccaccaccaccatcaccac
taccatttagggaatggtagcatgaggggcatccggtgtgtggagggtagagatgtggag
gctcataacaacaatggaggcacgcttgttgcaaccgccggacatcttgctttgccacca
tcagtaactacagccacgtctgatacgaacctgtccactttgtccaatcctgcgtccgat
ttatcttcagttatcagtgttttccacgcagaaactcttcgttgtaccccttcgccaaca
tctcattccttcccaatcgccaccgctccaatgtccaaatccatgaagaggaactcggta
cctttcgcgggtccggcgccgaagaactacccgacccttcaggcccgagcgctcgctgag
tcgagacgagcgagtgctgccgccggcactctgaccaacatcagcttcaacctcaatatc
ccacctgtaccgcaggagacacgcccgtcaagcctggtggacacacacactcccacagcc
cagctctccggccagctgtcggtttgtgacctcagcgctgtggacacagtggctctgact
tttgaccctgagagctgcccttactgcgccaaagctctggccaacgagtccgagggcggc
aacggagactcggacagtgagggaatatacgagttcacccaggacctccaccacagggac
cgaagggacagccggcggcccaaaaagaagcagcacgggctgtgtagaacggccgggaag
gtggtgcgtttctggaggttggtgtgcgacacgttcaggaagatcgtggacagcaagtac
ttcggccgagggattatgatcgccatcctgatcaacactctgagcatggggatcgagtac
cacgagcagccggacgagctgaccaacgctctggagatcagtaacatcgtgttcaccagc
ctcttcgctctggagatgctgctcaaggttttagtctacgggccgttcggatacatcaag
aacccgtacaacatcttcgacggcatcatcgtggtcatcagtgtgtgggagatcgtgggt
cagcagggcgggggtctgtcggtgctgaggaccttcagattgatgcgggttctgaagctg
gttcgcttcatgccggctctgcagagacagctggtggttctgatgaagaccatggacaac
gtggccaccttctgcatgctgctgatgctcttcatcttcatcttcagtatcctggggatg
catctgttcggatgtaagtttggatccgaggatctggcgaataaagacacgatgccggac
cggaagaacttcgactcgctgctctgggccatcgtcaccgtcttccagatcctcacccag
gaggactggaacaaggtgttatataacggcatgtactccaccactcctgtagccgcgctc
tacttcatcgccctcatgaccttcgggaactacgtcctcttcaacctgctggtggccatc
ctggtggagggtttccagacggagggagaggattcaaaaccgccttcagagatcggttcc
tgtgctcgaagtatggaggatgttaacggcagcaagaaggatttatcagcgtctgcagta
gtgcctgtaaatggtcacgtggacctgaagacgagcctcactccgcctgttatcacccac
acggctgccacccccatggcggtgctgaagttacccgtcggaggagaccccatcctgggc
ttcgagtcccgaagaggcagcaacgtctccatggagccggcctgctacgacaaatcaccg
accagctcctcctctccggcccccattggttggacgagccgtcgctccagctggaacagt
ttgagtcgagctccgtctctcaagaagaagcagcagcagtctggagagcgacggtccctc
ctttctggggagggggggtccagctctgaagaaggagaagatggaggtggaggaggagga
ggaggaggaggaggaggaggtggaggtggtttgatggaagaagataacgcctctctggtc
aggacagactccatgtctcagaaagcgcctcgacaccggaggatggagtcgttggagaca
aggagctccatggagttacctcctgatgtcctgctgcaggtgccgaatctgcaccgctca
gccagcatgctcagctccagacccccctcactcggacacttacggaccccagaacacagc
gactgcaacgggaagggatctcctgcatcactgggtccaacacatgtctctctggaggac
aacaccgaggacgagaacgcagaggaagaagctaacctgagtcttgtttccagactgttc
ctctggctggagaagaagcagcctgattggtgcagacagagagacacctggtcaatgtac
ctgttccctccagagtccaggtttcggatagtttgcactaggatcatcacccacaagatg
ttcgaccacatcgtgttgctcatcatcttcctcaactgcatcaccatcgccatggagagg
ccctacatctccacggttgagcggatcttcctcaaactgaccaactacatcttcaccgcc
atcttcgtggcagagatgttcataaagatcgtgtctctgggctggtgcttcggggagaag
tcgtacctgaggagcagctggaaccttctggacgggatgctggtgatgatctccgtcatc
gacatcctcgtctctctcctctcaaactccggcaccaagatcctcggcatgctgagagtg
ctgcggctcctcaggaccctcagacccctacgagtgatcagcagggctccggggctgaaa
ctcgtggtggagactctgatgtcgtcgctgaagccgatcgggaacatcgtggtgatctgc
tgcgccttcttcatcatcttcggcatcctgggagtgcagctcttcaaggggaagttcttt
atttgccaaggagaagatatcggaaacgtcaccaacaagtcggactgtttgcaggccaac
aagaagtgggtcagacacaagtacaacttcgacaaccttggacaggccttgatgtctctg
tttgttctggcgtccaaagacggctgggtggacatcatgtattacggactggacgctgta
ggagttgaccaacagccggtcatgaactacaacccgtggatgctgctgtacttcatctcc
ttcctgctgatcgtggccttcttcgtgctcaacatgttcgtgggcgtcgtggtggagaac
ttccacaagtgccggcgccaccaagaggccgaggaggccaagcgcagggaggagaagaga
ctgaaacgcatggagaaaaagagacggaaagctcagagtaagccttactactcagattac
tcccccactcgcctggtcatccacaagctgtgcaccagcacctacctggacctcttcatc
agcatcatcatcggcctgaacgtcatcaccatgtctatggagcactaccagcagcccaag
gagttggagcaggcgctgacgatctgtaactacatcttcaccctcatcttcgttctggaa
gccgtcttcaagctcgtggcgtttgggttcagacgcttctttaaagacaagtggaaccag
ctggatctggccatcgtgctgctgtccatcatgggcatcactctggaggagatcgatgga
aacactctgcccatcaacccgactatcatccgcatcatgagggtgctgaggatcgcacga
gtgttgaagctcctgaagatggcggtggggatgcgagcgttgctggacaccgttatgcaa
gccctgcctcaggtggggaacctgggtctcctcttcatgcttctcttctttattttcgca
gcgctgggagtggagctgtttggtgacttgatttgtgatgagctgcatccgtgtgaaggt
cttggacgctacgctaccttcaagaactttgggatggctttcctgctgctcttcagagtt
tcaactggagacaactggaacggcataatgaaggacacgttgagggactgcgggcaggac
tccataaccacctgctacaacaccgtcgtttctcccatctacttcgtctccttcgtgctc
accgctcagttcgtcctcgttaacgtggtcatcgccgtcctgatgaagcacctggaggag
agcaataaggaggccaaggaggaggcggagctggaggcggagctagagctggagaggcag
ctgatggggggcaacatggaggggaggtccccccaacacaaccctctgatcctgggcatg
gacaggagcagcgctggggggtccccctggaggtctggaggaggaggaggaggaggagag
ggaggaggaggaggaggagacatggagtcgcccactgctgatatacccagagactctgtg
aacatcagagcagattcaccttcatgtctggagcccccgctggagggttctgctgagatg
gagttgagtttgatggataatctttccgggtctatctgccatttctacgctctgcccccc
cagcccagagagcacagcaccgacaaaaaggaggagcagctggaccccgagcagccgctg
gaggaaaaccttctgagcgtcaggaagccggcggtggtccgaactcactccctgcccaac
gacagctacatgttcgaaaacacggcccccccggatcagattatagcacaggaccagggg
cccgagcacacagggggcccccacaggaaccaatcaggtactgaacgagctccagaggct
cgtctgcttcagccggaggacctctcccagctgagggtccctgcagacttcttcagaccc
atcagccccaacagcctctccgactcggagtgcataccccgcctgccccccccccgacgc
acacacacactgagccgcacgctgcgcagacagctcagttggccccaaaaaaaacccgac
cccgagctgctgcacaaacacaggaactcctgtttctga
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