Trematomus bernacchii (emerald rockcod): 117484404
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Entry
117484404 CDS
T09643
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04020
Calcium signaling pathway
tben04080
Neuroactive ligand-receptor interaction
tben04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117484404
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117484404
04081 Hormone signaling
117484404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tben04030
]
117484404
G protein-coupled receptors [BR:
tben04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
117484404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7tm_4
7TM_GPCR_Srx
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
117484404
NCBI-ProteinID:
XP_033988758
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MTNNVSSRMDTPTNISLSPSAAVSDSLEYKAVSVFLVLVVCGAGIVGNIMVVLVVLTTRH
MRTPTNCYLVSLAIADLTVLVAAGLPNVSDSLTGTWIFGHAGCLGITYLQYLGINVSSCS
ITAFTLERYIAICHPMKAQTVCTVSRAKRIIAGVWFFTCVYCMLWFFLVDIQVNQDGHVQ
CGYKVKRELYLPIYLIDFAIFYVIPLLLAIVLYGLIARILYLSPLSTLPDTSATTLRRSC
RDASEAGRKAGRQSRPKSALSSRKQVTKMLAVVVILFALLWMPYRTLVLINSFVSTPYLD
AWFLLFCRTCIYANSAINPVIYNAMSQKFRSAFRGLYRCQRPEANHRTLSMIQTGFGTVR
DPRTSQADSNGTNEKARRDLMKTAIEMTSQQNGSSHQETTTVNGKAADHATNMGPAALRS
VGGPAETALSGDQVLGWPSLDDTTVYLADRPAAVHQQENI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaacgtgagctccagaatggacaccccgaccaacatctctctgagtcccagc
gccgccgtctctgactcgctggagtacaaggcggtgtcagtgttcctggtccttgtggtt
tgtggtgcgggcatcgtgggaaacatcatggtggtcctcgtggtcctcaccacccgtcac
atgaggacacccaccaactgttacctggtcagcctggccatagcggacctgacggtgctg
gtggcggcggggctgcccaacgtgtccgacagtctgacgggaacgtggatatttggccac
gccggctgcctgggcatcacctaccttcagtacctgggcataaacgtgtcctcctgctcc
atcactgccttcaccctggagaggtacatagctatctgccatcccatgaaggctcagacc
gtgtgcacagtgtcccgggccaagcggatcatcgcaggcgtgtggttcttcacctgcgtc
tactgcatgttgtggtttttcctggtggacattcaggtgaaccaggacggacatgtgcag
tgtggctacaaagtcaaacgggagctctacctgcccatatacctcattgacttcgccatt
ttctacgtcataccgctgctcctcgccatcgtgctgtatggcttgatagcacggatcctc
tacctcagcccgctgtccaccctccctgacaccagcgccaccaccctgcgccgcagctgc
cgggacgcctctgaagctgggaggaaggcgggtcgccagagccggccaaagagcgccctc
tcctccaggaaacaggtgacaaagatgctggcagtagtggtgatcctctttgctcttctg
tggatgccataccggactttagttttgatcaactcttttgtgtccacaccttatctggat
gcctggttcctcctgttttgtcggacgtgcatctatgccaacagcgctataaatcctgtc
atatacaatgctatgtctcagaagtttcgctcagcctttcgcgggctttaccgttgccag
agaccagaggctaatcataggacactatcaatgattcagactggcttcggcaccgtcaga
gacccacgaacctcgcaggccgatagcaatggaaccaatgaaaaggctaggagagaccta
atgaaaactgcaattgagatgacctcacagcaaaatggaagcagccaccaggagacaaca
actgtcaatggcaaggcagcagaccatgccaccaacatgggcccagctgctctcagatct
gttgggggtccagctgagacggctctatctggagatcaggtgttaggttggccttcatta
gatgatactacagtttatttagcagacagacctgcagccgtccatcagcaggagaacatt
taa
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