Trematomus bernacchii (emerald rockcod): 117484413
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Entry
117484413 CDS
T09643
Symbol
ppfibp2b
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-beta-2b
KO
K27096
liprin-beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117484413 (ppfibp2b)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117484413 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
117484413
NCBI-ProteinID:
XP_033988768
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MKPQSLRDQNTLDLALSTIIMDTEASHMLEAALEQMDDIIAGSKAAAVEFSNRMYEQGSP
VSGAPLQLAEELKLALELQQNQEERDSLRAQLPAGTAQLLIDWLQTGTAKQCSSANHETY
QERLLRLEGDKESLVLQVSILTDQVKAQGEKIRDLESSLEQHRQKLASTEVMLQQELMSR
TSLETQKLDLMDEVSFLKLKLVSIEETHTNTQQPDPTDTEQNKAECVVNLISDLQEQMCR
FQEEISTRIQEKRALEEREAQQGEPRGSDPPGHSLGAGSVSSDLSLAASDPLRPDGGQNV
HDLLQEVKQLKRKVEDLQGEKGQYERKLRATKSLMSQLSSLQLKVEHMQLEKQQWEESCH
SAQADISELQQLLASKDAEIECLQTQLMARGGTADENTEREEEYIKQLINKYQEYQRLKI
GMESLLASNDEKERRIEELTILLGQYRKMREVMALTQGSSDEDLSGCSGVRAFTHKAHSD
IVRSEMSSLSSSPFVLSSSPYQRGFDSSIHDSMDTSLVSTGETSFCNGSWHQRRLLSSSL
EELQSGSLQKNPHMELSKYQTLPGKLMINKREQRARKHGDREGEEEYLSPVHCLQQEDYG
LNQPEKLKECVLSDQSPLSFGVDSGQQSPVSPENRKSQRGIRKLWGKIRHSQSGSPAQGH
DHELGELKRGGFRATAGPRLARSGNPRDLKMPFCKWSKEQVCDWLEEIGLGQYGVLACHW
VTSGDTLLSATMQDIEKEPAIKNPLHRKKLQLAIKTISSKQPDKSAELDYIWVTRWLDDI
GLPQYKDQFNEGRVDGQMLQFLTVNELLFLKVTSQLHHLSLKSAIHVLHVNKFNSNCLKR
RPSHQNQLAPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLLMLEPRFNPETLAM
LLNIPPEKTLLRRHLTTNFNNLVGAEAHLEKKVYTEAVGNTPLSITAKVKPKKLGFTNLT
HLRRRRPDESKDYVCPIESSLPRSGVPAVNDEVQVQPKAGFMGLSAVLDRESDCPRARVG
MDKSRDDQLPR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcagagtctccgcgatcagaacaccttagatctggccctttccaccatcatc
atggatacagaggctagtcacatgctggaggcagccctggagcagatggatgacatcatt
gcaggttccaaagcagcagcggtggagttttctaacaggatgtatgagcagggttccccc
gtcagtggcgctccccttcagttagctgaggagctcaaactggccttggagctccaacaa
aaccaggaggagagagacagcctgagagcacagctgcctgcaggaacagcacaacttctc
atagactggttgcagactggaactgcgaaacagtgttcttcagccaaccatgaaacctac
caagaacgactgctccgcctagaaggagacaaggagtctctggtgctacaggtgagcatt
ctgacagaccaggtgaaggcccagggagagaagatcagagacctagaaagttctctggag
caacaccggcaaaagttggcctctacagaggtgatgctgcaacaggagctgatgagcagg
acctctctggagactcagaagctggatctgatggacgaggtgtccttcctgaaactgaag
ctggtcagcatagaggagacacacaccaacacacagcaaccagaccccaccgacacagag
cagaacaaagccgagtgtgtggtaaatctcatcagtgatcttcaagagcagatgtgcagg
tttcaggaagagatcagcactcgtattcaggagaaacgggcactggaggagagggaggcc
cagcagggggaacccagaggcagcgaccccccgggccacagcctgggggccgggtcagtc
agctcagacctgagcctggctgcctccgaccccctgaggcccgatggaggacagaatgta
cacgatttgcttcaagaggtaaagcagctgaagagaaaagtggaggatttgcagggcgag
aagggccagtatgagagaaaactcagagccacaaagtcgctcatgagccagctgtccagt
ctgcagctgaaagtggagcacatgcagctggagaagcagcagtgggaggagagctgccac
agtgcacaggccgacatatcagagctgcagcaactcctggcctccaaagacgctgagatc
gaatgtctgcagacacaactgatggcaagaggcggcacagctgacgaaaacacagagaga
gaggaggagtatatcaagcagctgataaacaaataccaagaataccagaggctgaagatt
gggatggagtctttgttagcttcaaatgatgaaaaggagcgacgtatagaggagctgacc
attctgcttggccaatacagaaagatgagggaagtcatggcactcacacaggggagtagt
gatgaggatctgagtggctgttcaggagtcagagccttcacacataaagcacactctgat
attgtcagatcagagatgtcatcgctgtcatcttctccatttgtgctatcttcttccccc
taccagagaggatttgattctagtatccatgactctatggacacatcactggtgtccact
ggggaaacaagcttttgtaatgggtcatggcatcaacgcaggttgctttccagcagtctt
gaagaattgcagagtggatcattacaaaagaatcctcacatggagctgagcaagtaccag
actctgccggggaaactcatgataaataagagagagcagagagccaggaagcatggcgac
agagagggagaagaagagtatttgtctcctgtccactgcctccagcaggaggactacggt
ctcaatcaaccagaaaaactgaaggagtgtgttctgtcagatcagtcccccctttccttt
ggagtggactctggacagcaatctcctgtctcaccagagaacaggaagagtcagagaggc
attaggaaactctgggggaagatacgtcacagccaatcaggcagtcctgcccagggtcac
gaccacgagctgggagagctcaagagggggggtttccgagctacagctggaccaagactg
gcccgttcagggaacccacgagatctgaagatgcctttttgtaagtggagcaaagagcag
gtgtgtgactggctggaggaaattggactcggtcagtatggcgtcctcgcttgccattgg
gtcaccagtggtgatactctactgtctgccaccatgcaagacatagagaaggagccggcg
ataaagaatccgctccacaggaaaaagctccaattggccatcaagacgatcagcagcaaa
cagcctgataagtctgcagagctcgattacatctgggtcactcgttggcttgatgacatc
ggactccctcaatacaaagaccagtttaatgaaggaagagttgatgggcagatgctgcag
ttcctcactgtgaatgaattgttattccttaaagtgaccagccagctgcatcacctcagc
ctcaagagtgccattcatgttcttcatgtcaacaagttcaattccaactgcctcaaacgc
agacccagccatcagaaccagttggctccaagtgaggttgtccagtggtccaaccaccga
gtcatggagtggttaagatctgtggacctggcagagtacgctccgaacctgaggggcagt
ggcgtgcatggagggctgctaatgttggagcctcggtttaacccagaaacgctggccatg
ctgctaaacatcccaccggagaaaacactgctgagacgccacctaacaaccaactttaac
aacctggtgggagcagaggctcatctcgagaagaaggtgtacacggaggcagtggggaac
accccactcagcatcacagctaaagtcaagccaaagaagttgggcttcactaacttgact
catctcaggaggagacggccagatgaatccaaagactacgtgtgcccaatagagtcgtcc
ttgcctcggtcaggagtgcctgcagtgaacgatgaagtgcaggtgcagcctaaagctggc
ttcatgggtctgagcgcagtcctggaccgagagtcagactgccccagggcccgggttggg
atggacaagagcagagatgatcaattgccaagataa
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integrated database retrieval system
