Trematomus bernacchii (emerald rockcod): 117484429
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Entry
117484429 CDS
T09643
Symbol
arntl1a
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like 1a isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117484429 (arntl1a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117484429 (arntl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
117484429
NCBI-ProteinID:
XP_033988782
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MEGDDFNTEAVMNICDDLMADQRMDISSTMTDFMSPGSTDIISSSISTPGMDYTRKRKGS
TTDYQIDGFSFDDMDPDKDKLGGDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT
CNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFV
VGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLID
AKTGLPVKTDIPPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCT
IHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPSLADIRVKPTEYV
SRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINT
NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCPMMEGPDYPQSAASPQSM
DSALTSEGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNI
TSTPPPDTCSPGGKKNGETPDLPSTGILPGPDSVGYPYSNQSIMSDNSHLSIDIMDEPGS
SSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatgattttaacacagaggctgtgatgaacatctgtgatgacctgatggca
gaccaaaggatggacatctcgtctacaatgactgacttcatgtcacccggctccaccgac
atcatctccagctccatcagcacgcccggcatggactacacccgcaagaggaagggcagc
accacggattaccaaattgatggcttctcatttgatgacatggacccagacaaagataaa
ctgggaggtgaccaacagggccggattaagaatgccagagaggctcacagtcagatcgag
aagcggcgcagggacaaaatgaacagcttcatcgacgagctggcctctctggtgcccacc
tgcaacgccatgtctcgcaaactggacaagctgacggtgctgcgcatggccgtccagcac
atgaagaccctcagaggagcagccaacccgtacacagaggccaactacaagccctccttc
ctgtcagacgatgagctgaagcacctgatattaagggctgctgatggtttcctgtttgtg
gttgggtgtgaccgcgggaagatcctctttgtttctgagtccgtcttcaagattctcaac
tacagccagaatgacctgataggtcagagtctgtttgactaccttcacccgaaggacatc
gccaaggtcaaagagcagctgtcctcttcagacaccgccccccgagagcggctcatcgat
gccaaaactgggctcccggtgaagacggacatcccccccggcccctccagactctgctct
ggagccagacgctcgttcttctgcaggatgaagtgcaacaggccttctgtcaaagtggag
gacaaagactttccctccacctgctccaagaagaaagccgatcgtaagagcttctgcacc
atccacagcacgggctacctgaagagctggccccccaccaagatgggtctggacgaggac
aacgagcccgacaacgagggctgcaacctgagctgcctggtggctatcggccggctgcac
ccccacatcgtcccccagcccagcctggccgacatccgtgtgaagcccaccgagtacgtg
tcccgacacgccatcgacgggaagttcgtcttcgtcgaccagagagccacagccatcctg
gcctacctcccccaggaactgctgggaacctccttctacgagtacttccaccaggacgac
atcgggcacctggcagagtgtcacaggcaggtgctgcagatgagagagaagatcaacacc
aactgttacaagttcaagatcaaagacggctccttcatcacgctgaggagccgctggttc
agcttcatgaacccctggaccaaggaggtggagtacatcgtgtccaccaacaccgttgtg
tcgtgtcctatgatggagggacccgactaccctcagtctgcggcctccccacagagcatg
gacagtgctctcacctcagagggtggagggaggcgggccctgcagaccgtccctggcatc
cctggggggacgagagcaggagccgggaaaataggacgcatgatcgcagaggaggtgatg
gagatccagaggatccgaggctcctccccctccagctgtggctccagccctctgaacatc
accagcacccccccgccggacacctgctccccagggggcaagaagaacggagagacacct
gacctgccgagcactgggatccttcctggacctgactcagtgggctacccctactccaac
caatccatcatgagtgacaactcccacctgagtatagacatcatggacgagccgggctcc
agcagccccagcaacgacgaggcggccatggcggtcatcatgtccctgctggaggccgac
gccgggctgggggggcccgtggacttcagcgacctgccctggcctttgtga
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