Trematomus bernacchii (emerald rockcod): 117484466
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Entry
117484466 CDS
T09643
Symbol
gan
Name
(RefSeq) gigaxonin isoform X1
KO
K10453
kelch-like protein 16 (gigaxonin)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117484466 (gan)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117484466 (gan)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_1
Kelch_6
BACK
Kelch_KLHDC2_KLHL20_DRC7
BTB
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_5
NANM
BTB_3
Motif
Other DBs
NCBI-GeneID:
117484466
NCBI-ProteinID:
XP_033988828
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All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MPDSLSSEPGSKVSDPQHSQKLLRVLRLFWQEQSFHDALLVVDGEELPVQKNILAAASPY
VRTKLNYNPPKEDGSTYRIELQGVSMPIMKQILDYIFSGEITLNEETIQDMVQASDLLLL
TDLKALCCQFLESCITAENCLGIRLFSLHYCLNHVHFVATEFLQTHFGDVALTEEFRELP
ADRLCEALAMEKLNVGNERHVLEAVVRWFGHDSEDRKVHMKQVMSAVWQQGLDASYLKEQ
AMGEPLMREVIREYCQQVLGVGPLQGEAMLAAFKPRGYSECIVIAGGEDRKTRKPTSETR
CMCPLYDSSRQAWITLQPMSAPRLGHGVVTAEGFLFAIGGADEHNTVLDSGEKYDPDTNT
WSPIPPMLQPRQNFGVVELDGLIYVLGGETKESELITVEVFDPHCSAWKMLTSMTMIRKV
GCYASMNKKIYAIGGGSYGKLFDSVECYDPKTLQWTGLCPLKERRFGSVACGVGKELYVF
GGVRSKEQENPEQRQMMTCKSEFYHDEMRRWIFLDDQTLCIQTSSSFVYGAVPIGASIYV
VGDLDTGTSFDYIREFRRSTGTWQRTRPMLPSDLSKTACAGLRIANCRLFRLQWSQDMFR
VRV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccttatcaagtgaacctggttcgaaggtttcggacccacaacattcccag
aaactcctccgagtcctccgcctgttctggcaggagcaaagtttccatgatgcgctgctg
gtggtggatggcgaggagcttcctgtccagaagaacatcctggctgctgccagcccttat
gtcaggaccaagctgaactacaatcctccaaaagaagatgggtctacatacagaatcgag
ctacagggggtctccatgcccatcatgaaacaaatcctggactacattttcagcggagaa
atcactctgaatgaagagaccatccaggacatggttcaggcgtctgacctgctcctcctg
accgacctgaaggccctgtgctgccagttcctagagagctgcatcactgcagagaactgt
ctcggaatccggctcttttctttgcactactgccttaaccatgtccactttgtcgccacg
gagttcctgcagacacattttggcgatgtggccctcactgaggagttcagggagctgccc
gcggaccgcctctgcgaggcgctggccatggagaaactgaatgtgggcaacgaaaggcac
gtcctggaggctgtggtgcgatggttcggacatgactcagaggatcgcaaggtacacatg
aagcaagtgatgtctgcagtgtggcagcagggtctggatgcaagctacctgaaagagcag
gccatgggagagccgctgatgagggaggtgatcagagagtactgccagcaggtgctgggc
gtcggccccctgcagggtgaggctatgctcgccgccttcaaacccagaggttactcagaa
tgtattgtcatagccggaggagaggatcgcaaaaccaggaagccgacctctgagacgcgc
tgcatgtgtccgctctacgactccagcaggcaggcctggattacgctgcagcccatgagc
gccccccgcctgggccacggggtcgtcactgccgagggttttctgtttgcgatcggcgga
gcagatgaacacaacacagtcctagacagtggagaaaaatatgaccctgacaccaacacc
tggagccctatacccccaatgctacagccgcgtcagaactttggcgtggtggagctggac
ggtctgatctacgtcctcggaggagagaccaaagaatcagagctgatcactgtggaggtg
ttcgaccctcactgcagtgcctggaaaatgctgaccagtatgaccatgatccgcaaggtg
ggttgctacgcctccatgaataagaagatctatgccatcggcgggggctcctacgggaag
ctgtttgactccgttgaatgctacgacccgaaaaccctgcagtggacgggcctctgtcct
ctgaaggagagaaggtttgggtcggtggcgtgtggcgttggcaaggagctctacgtgttt
ggcggagtgagaagcaaagagcaagaaaaccccgagcaaaggcagatgatgacctgcaag
tctgagttctaccatgacgagatgaggaggtggattttcctggatgaccagaccctgtgt
atccagaccagctcctccttcgtttatggcgctgtgcccatcggagccagcatctatgtg
gttggagacctggacaccggaaccagtttcgactacatcagggagtttcgccgcagtact
gggacgtggcagcgcaccagacccatgttacccagcgatctctccaaaacagcgtgcgca
ggcctgcgcatcgccaactgtcgactgttccgcctgcagtggagccaggacatgttccgg
gtccgagtttga
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