Trematomus bernacchii (emerald rockcod): 117484540
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Entry
117484540 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117484540
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117484540
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
U-box
zf-rbx1
Prok-RING_4
PEHE
zf-ANAPC11
DUF1444
UPF0242
TMPIT
Motif
Other DBs
NCBI-GeneID:
117484540
NCBI-ProteinID:
XP_033988860
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MASRLEEDLCCTVCHDIFKYPVVLSCSHSFCRDCLQNWWTEKVIKECPLCKRSSVYEPPC
NLVLKNLCETFLQERGQRSPEALCSLHSEKLKLFCLDHQQPVCVVCRDSKIHKKHSFKPI
DEAAQDLKEELQETLQPFKKKLETLEEVKVKFDQTAEHLKVQARRTETQIKEQFKKLHQF
LEEEEEARMAALREEEEQKRRMMEEKMEAVSREIAALSHTVRATEEELRAEDVSFLLNYK
AAVERLQRPLLEDPQLPSGALIDQAKHLGNLSFNIWSKMKDLVSYSPLILDPNTAYPELI
LSEDLTSVRGGGKEELPDNPERFDDYWSVLSSEGFNSGTHSWEVQVGDSQIWELGVLAES
VQRKGDIESGLWRIDYNQGEYSAESPPDPETPLSLQKGPQRVRVDLDWNRGKLSFSDPDT
NTHIHTFTHTFTERLFPYIYNWDGPPLKVLPMKVSDCRTTDIDDDDDDDDDDDDDDDDDD
DDDDDDDDDDDDDDDV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagattagaggaagatctctgctgtactgtctgccatgacatctttaaatat
cctgtggtcctgtcatgcagccacagcttctgtagagactgtctgcagaactggtggacg
gagaaagtcatcaaagagtgtccactttgtaagagatcttcagtttatgaacctccctgt
aacctggtgttaaagaacctgtgtgagaccttcctacaggagagaggtcagagatctcca
gaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcag
ccagtgtgtgtcgtctgcagagattcaaagatccacaaaaaacacagtttcaaacccatc
gatgaagctgctcaggatctcaaagaggagctccaggaaactctgcagcccttcaagaag
aagttagagactttagaagaagttaaagtgaagtttgatcaaacagcagaacacctgaag
gtccaggctcgacgcacagagacacagattaaggagcagtttaagaagcttcaccagttt
ctagaagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaagagg
aggatgatggaggagaagatggaggctgtgagcagagagatagcagctctttcacacaca
gtcagagccacagaggaggagctgagagctgaagacgtctccttcctgctcaactacaag
gctgcagtggagaggctgcagcgccccctgctggaggatccacagctgccctcaggagct
ctgatagaccaggccaaacacctgggcaacctcagcttcaacatctggagcaagatgaag
gacttggtgtcctactctcctctcatcctggacccaaacactgcttatccagaactcatc
ctgtctgaagatctgaccagtgtgagaggaggaggaaaggaggaacttcctgataatcca
gagaggtttgatgattactggtctgtcctgagctctgagggctttaactcagggactcac
agctgggaagtccaggttggagacagtcaaatctgggaactgggtgtgttagcagagtct
gtccagaggaagggagacatagagtctggattatggagaatagattataatcaaggtgaa
tactcagcagagtcaccaccagatccagaaactcctctcagcctgcagaaggggccccag
agggtcagagtggatctggactggaacagaggaaagctgtcgttctctgatcctgacact
aacacacacatacacaccttcacacacactttcactgagaggctgtttccatacatttac
aattgggatggacccccactcaaggtgttaccaatgaaggtctctgactgtagaacaaca
gatatagatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgat
gatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgtatag
DBGET
integrated database retrieval system
