Trematomus bernacchii (emerald rockcod): 117484742
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Entry
117484742 CDS
T09643
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03082
ATP-dependent chromatin remodeling
tben03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117484742
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117484742
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117484742
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117484742
03036 Chromosome and associated proteins [BR:
tben03036
]
117484742
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117484742
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117484742
SWI/SNF complex
117484742
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117484742
PBAF complex
117484742
SWI/SNF complex
117484742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
117484742
NCBI-ProteinID:
XP_033989051
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEEDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKGKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPNDGILEEQ
QDQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QISWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggctctaagtaaaacgtttggccagaaaccagttaaatttcaattagaagaa
gatggagacttttacatggttgggtcagaggttggaaactacctgcgtatgttcagagga
tctctgtataagagatacccatctttatggaggaggctggcctccgtggaggagaggaag
aagatcgtagcatcgtcacacgccaccagtgtcactctgctgaaggcctcagagtgtgag
gagatctttgaggggaatgatgagaaatacaaggcggtgtccatcagcacagagcccccg
gcgtacctcagggagcagaagggcaagaggagcagtcagtgggtgcccaccctgcccaac
agctcccaccacctggatgctgtgccctgctccaccaccatcaaccgcaaccgcatgggc
cgggacaagaagaggaccttccccctgtgctttgatgaccacgaccccgcagtgatccat
gagaacgcagcgcaggtggaggcgctggttcccatccggctggacatggaaatcgatgga
cagaaactgagagatgccttcacttggaacatgaatgagaagctgatgaccccggagatg
tttgcagagatcttgtgtgatgacctggacctgaatcctctggccttcgtccctgccatc
gcctccgccatccgtcagcagatcgagtcgtaccccaacgacggcatcctggaggagcag
caggaccagagggtcatcatcaagctgaacatccacgtggggaacatttctctggtggac
cagtttgagtgggacatgtctgagagagagaactcccccgagtccttcgccctgaagctg
tgctctgagctgggtctggggggggaatttgttaccaccatcgcctacagcatccgcggt
cagatcagctggcaccagaggacctacgccttcagtgagaaccccctcccaacagtagag
atagccatccgcaacacaggagacgcagaccagtggtgccccctgctggagaccctcaca
gacgctgagatggagaagaagatccgagaccaggacaggaacaccaggcgtatgagaaga
ctggccaacaccgctccgtcctggtag
DBGET
integrated database retrieval system
