Trematomus bernacchii (emerald rockcod): 117484746
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Entry
117484746 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin alpha chain, non-erythrocytic 1-like
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04210
Apoptosis
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117484746
09142 Cell motility
04820 Cytoskeleton in muscle cells
117484746
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117484746
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117484746
Intermediate filaments
Intermediate filament-binding proteins
117484746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
SH3_1
SH3_9
SH3_2
SH3_3
SH3_10
B-CoV_A_NSP1
Motif
Other DBs
NCBI-GeneID:
117484746
NCBI-ProteinID:
XP_033989054
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MDTAGAKVLETAEDIQERRQQVLDRYRRFKELSIMRRTKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDDTGNLMITEGHFSSETI
RTRLEELHRLWDLLLMRTKEKGTRLLQAQKLVQYLRECEDALDWISDKETMATSEELGQD
LEHVELLQKKFEEFQTDLAAHEERVNEVNQLAAKLIQEAHPEAELIVRKQDEVNAAWQRL
KGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGDAERLQQTHPHNASQIHLKKDELITNWEQIRTLAAERHTRLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRST
DEAGQALLDTGHYASEEVKEKLGILSSEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVADRMEEVGSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVSRYEGLREPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVSQKGEAMVEEGHFAGEEVKVKLGELHGRWDTLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIHALKEQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEHGSIALRQDQTDNQYGTLLELGEKRKDMLEKSCKKFMLFREA
NELQQWINEKESALTNEEMGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESE
GLMAEEAPMVQAQQQQEMLGSAPGKDEADSKTASPWKNIRVAVQTTANFNTIKELNNRWR
SLQQLAEERSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHE
GFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELNTAWSSLVGRADQRKDKLG
NSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEXLLERHQEHRTEIDARAGTFQ
AFEQFGQQLLVRGHYASPEIQQKLEALDHERADLEKAWVQRRMMLDQCLELQLFNRDCEQ
AENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLVGADH
YAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATD
ESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGNTLIQRGACAGSEDAVKA
RLSALDEQWQFLVNKSAEKSQKLKEANKPELQHRIKDFDFWLSEVEALLASEDYGKDLAS
VNNLLKKHQLLEADISAHEDRLKDLNGQXDSLMGSQAFDTSQVKDKRNAVNGRFARSRAA
AGRRPNSTSPHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKXKRLEAEL
GAHEPAIQSVLDTGKKLSDDNTIXQEEIQQRLAQFVDHWKELKDLSGAR
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcaggggccaaagtgctggagacagccgaggacatccaggagcgccggcag
caggtgctggaccgctaccgccgcttcaaagagctgtccatcatgcggcgcaccaagctg
gaggactcttaccgcttccagttcttccggcgcgacgccgatgagctggagaagtggatc
caagagaagctgcagattgcctctgatgagaactacaaggacccctccaacctgcagggt
aagctgcagaaacatcaggcctttgaggctgaagtccaggccaacgcgggggccatcatc
aaactggacgacactgggaacctgatgatcacagagggccacttctcctctgagaccatc
cgaactcgtctggaggagctgcatcgcctctgggacctcctgctgatgaggaccaaggag
aagggcacgcgcctcctgcaggcccagaagctggtccagtacctgcgtgagtgtgaggat
gccctggactggatcagtgacaaggagaccatggccacctcggaggagctgggccaggac
ctggagcatgtggaactcttgcagaagaagtttgaggagtttcagaccgacctggctgcg
cacgaggagcgtgttaacgaggtgaaccaactggcagccaagctgatacaggaggcccac
cctgaggcggagctcattgtccgcaagcaggacgaggtgaacgccgcctggcagcgcctg
aagggcctggcccagcagaggcagggccggctgttcggggcggctgaggtgcagcgcttc
aacagggatgtggatgagaccatcagctggatcaaggagaaggagcagctgatggcctct
gatgactttggtcgtgacctggccagtgtgcaggctctgcttcgcaaacacgagggtctg
gagagagacctggctgctctggaggataaggtcaacactctgggtggagatgcagagcgc
ctgcagcagacacatccccacaacgcctcccagatccacttgaagaaggacgaactcatc
accaactgggaacagatccgcactctggccgcggagcgccacacccgcctcaacgactcc
taccggctgcagcgcttcactgctgacttcagggatctgaccagctgggtgacggagatg
aaagctctgatcaatgctgacgaactggccaatgacgtggctggagctgaggctctgctc
gaccgccaccaggagcataagggagagatcgatgcccatgaagacagtttcagatccacg
gatgaagctggccaagcattactcgatacaggacactatgcctctgaggaggtcaaggaa
aagctgggcatcctttcctcggagaaggagtccctgctggagctgtgggaggtccgcagg
cagcagtatgagcagtgcatggacctgcagctcttctacagggacactgagcaagttgac
aactggatgagcaaacaagaggctttcctcctcaatgaagacctgggggactccctggac
agtgtagaggccctgctgaagaaacatgaggactttgagaagtcactcagtgcccaggaa
gaaaagatcaccgccctggatgagtttgctaccaaactgatccagaacaaccactatgcc
aaagaggacgttgctactcgcagagatgctctgctcagccgccgcaacgccttgcatgaa
cgcgctcagtctcgccgtgctgctctggaggactccttccacctgcagcagttcttcagg
gactctgatgagctcaagagctggatcaacgagaagatgaagaccgccacagatgaggct
tacaaggacccctccaaccttcagggcaaggtgcagaaacaccaggcttttgaagctgag
ctttcagccaatcagagccgcatcgatgccctgcagaagtctggccaggagctgcttgac
ggaaagcattacgcctccactgaggtggccgaccgcatggaggaggtcggctcccagtgg
aagaaacttctggaggccaccgagctcaaaggtatcaagctccgtgaggccaaccagcag
cagcagttcaacagaaacgtggaggacatcgagctgtggctgtatgaggttgagggacac
ctagcttcagacgattacgggaaagacctgaccagtgtccagaacctgcagaagaagcat
gcactgctggaggccgacgtggcagcccaccaggatcgcattgatggcataactatccag
gctcgccagttccaagaagctggacactttgatgcagacaacatccgcaagaaacaggag
gctttagtgtcgcggtatgaaggtctgcgcgagcccatggctgcacgcaagcagaagctg
tccgactctctgcggctgcagcagctgttcagagatgtggaggatgaggagacttggatc
cgtgagaaagagcccattgctgcctctactaacagaggcaaagacctgattggtgtccag
aacctgctgaagaagcaccaggccctgcaggcagagatcagcggccatgagcctcgcatt
aaggctgtctcccagaaaggagaggccatggtggaggaaggacactttgccggggaggag
gtgaaggtgaagctgggtgagctgcatggacgctgggacacgctgaaggccaaggcttcc
cagaggagacaggacctggaggactctctgcaggcccagcagtactttgctgatgccaac
gaggctgagtcctggatgagggagaaggagcccatcgtggggagcccagactacggcaaa
gacgaggactctgctgaggcgctgctgaagaagcacgaggccctgatgtcggacctgagt
gcttacggcagcagcattcatgctctgaaggagcaggcccagtcctgcaggcaacaagtg
gccccaactgatgatgagaccgggaaggagctggtgctggccctgtacgactaccaggag
aagagcccccgtgaagtcaccatgaagaagggggacatcctcaccctgctcaacagcacc
aacaaggattggtggaaggtggaggtgaacgatcgccagggctttgttcctgctgcctat
gtgaagaagctggaccccacccagtcctcttcaagggaaaacctgctggatgaacacggc
agcatcgcactgcgccaagaccagacagacaatcagtatggtactctgttggagctggga
gagaaacgcaaggacatgctggagaagagctgcaagaagttcatgttgttccgcgaggcc
aacgagctgcagcagtggatcaacgagaaggagagcgccctcactaacgaggagatgggc
tctgacctggagcaggtggaggtcctgcagaagaagtttgacgacttccagaaggacctg
aaggccaacgagtctcggctgagggacatcaacaaagtggcatctgagctggagtctgag
ggcctcatggcggaggaggcccctatggtccaggctcagcagcagcaagagatgctcggt
tctgctcccggcaaggatgaagctgattccaagactgcatctccatggaagaatatacgc
gtggctgttcaaacaacggctaactttaatactatcaaggagctgaacaatcgctggcgg
tccctgcagcagctggctgaagaaaggagcaacatgctgggcagtgcccacgaggtgcag
cgcttccacagggatgctgatgaaactaaagagtggatcgaggagaagaaccaggccctc
aacacagacaactacggccatgacctggccagtgtgcaagctctgcagcgcaaacacgaa
ggctttgagagggacctggcagctctgggagataaggtgaactctctcggggagacagct
gagcgtctgatccagtcccaccctgaggccgtggacgacatccaggagaaatgcacggag
ctgaacaccgcatggagcagcctggtggggagagctgaccagcgcaaagacaagctgggc
aactcccacgacctgcagcgcttcctgtccgacttcagagatctgatgtcctggattaat
ggcattcgggggctggtgtcctcggaggagctggccaaagatgtaaccggagctgagngc
cttctggagagacaccaggaacaccgcacagagatcgatgctcgtgctggaaccttccaa
gcctttgaacagtttggtcagcagttgctggtgcgcggccactatgccagtcctgagatc
cagcagaaactagaagctctggaccatgagcgtgctgacctggagaaggcctgggtgcag
cgccgcatgatgttggaccagtgcctggaactgcagctcttcaacagggactgtgagcag
gctgagaactggatggccgctcgggaagctttccttgctagtgatgacaagggtgactcc
ctggacagtgtggaagccctcatcaagaaacatgaagactttgacaaggccatcaacgtg
caggaggagaaaatcgctgctctgcagtcctttgctgaccagctggtcggagccgaccat
tacgccaaacctgagatctttaaccgccgaaatgaggtcctggacaggtggcgccggctg
aaggctcagatgatcgaaaagcgttccaagctgggtgagtcgcagaccctgcagcagttc
agccgggacgtggatgagatcgaggcttggatcagcgagaagctgcaaactgcaacagac
gaatcctacaaagaccccaccaacatccagctgtccaagctgctgagtaagcatcagaaa
catcaggcgttcgaggccgagctgcacgccaacgcagaccggatccgcggggtcatcgac
acgggaaacaccctgatccagagaggagcctgcgccggcagcgaggacgcagtcaaggcg
cgcctcagtgctctggatgagcagtggcagttcctcgtcaacaagtcagcggaaaagagc
cagaaactgaaggaggccaacaagccagaacttcaacaccgcatcaaggacttcgacttc
tggctctctgaggtggaagctcttctggcctctgaagactatggcaaagatctggcctca
gtcaacaacctgctgaagaaacaccagctgctggaggctgatatctctgcgcatgaggat
cgtctgaaggatctgaacggccagncggacagcctgatgggcagccaggccttcgacacc
tcccaggtgaaggacaagcgcaatgccgtcaacggccgctttgccagatcaagagcagct
gcagggcgccggccaaactcaacgagtccccaccgcctgcaccagttcttcagggacctg
gatgatgaagagtcttggatcaaagagaagaagctgcttgtgagttcagaggactacgga
cgtgatttgacaggagtacagaatctgaggaagaaanncaagaggctggaggcggagctg
ggagcccacgagccggccatccagtcggtgctggacactgggaagaagctgtctgatgac
aacaccatcngccaggaggagatccagcagaggctggcccagtttgtggaccactggaag
gaactcaaagacttatctggagcaaggtaa
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integrated database retrieval system
