Trematomus bernacchii (emerald rockcod): 117484878
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Entry
117484878 CDS
T09643
Symbol
cacna2d4a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04260
Cardiac muscle contraction
tben04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117484878 (cacna2d4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117484878 (cacna2d4a)
04261 Adrenergic signaling in cardiomyocytes
117484878 (cacna2d4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117484878 (cacna2d4a)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117484878 (cacna2d4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
VWA_2
dCache_1
MCP-like_PDC_1
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117484878
NCBI-ProteinID:
XP_033989214
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MNRWSRGSGPRRGRLMMLLWIILSSSLCRMVDGQMKISPETVQKWAVSFSKEIAALSARY
SGAKLLQKKYKDVEAVVKIEEVDGEELVKKFAEEMEEMLGRKMKSVKRLAEAAEDADLYH
EYNETLEFEYFNSMLINKVDEDGNSLSLGGEFTLEKNEHFNKLPVNTQLSNIQVPTNVYN
RDTDIVNGAYMSEALNDVFIDNFKKDPTLTWQYFGSATGFFRLYPGIQWIPDENGVVTFD
CRNRNWYIQAATSPKDVVIVVDVSGSMKGLRLTIAKHTINTILDTLGENDFVNIIAYSDY
VRYVEPCFKGTLVQADLDNREHFKLLVDELHVKGEGKVKIAMKESFKILNEVAALGQGSL
CNQAIMLITDGAMEDFQDVFEEFNWPERRVRVFTYLIGREMTFADNVKWIACNNKGYYTH
VSTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSVLFNTQAQSLLLMTSVAMPVF
SKKEETLSHGILLGVVGTDVALRELMRLAPRYKLGVHGYGYLITNNGYILSHPDLRPLYK
EGKTLKPKPNYNSVDLAEVEWEDTEEKLRTAMVKGETGTLSLDVRTSVDKGTRVMFLKND
YFYTVINETPFSLGIVLTRGYGEYIFIGNVSVEEGLHDLLAPDLTIASEWTYCETDIDPA
HRKLTQLQAVVRYLTGKEPDLDCDVQLLQQTLFDAVVTAPMEAYWTALMLNASGMEEGVE
TAFMGTRSGLMRFQRYAGVEKRVGKSFLTSTDKENMFTLDHFPVWYRRASENPAGQFLYY
MPRQETRAGRIVIATTSVTVTVGKKTAIAGAIGIQMTLDVLESKFWAIAAQPNDTDCSDV
DGICPLRCDSVDIACYMIDNNGFVLISKQRNDAGRFFGEIDGSVMTTLIRMGMFKRVSLF
DYQAMCKMNSHSVSSARPLLSPFYGLASALKWFLSNFLLFLLEFNFCGFWHTEHFADAKA
SFSVSSAHKKRGDILQPCDTEYPSFVYEPSVKETNSIIKCGRCQKMFVVQQIPDSNLLML
VVQADCDCSKQYPPITMEPKEVKYNASVKCDRMRSQKIRRRPESCHAYHPQENANDCGGA
SVISLSASLFLACLSFSTRVS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctggagcaggggaagtgggccgcgcagagggaggctgatgatgctgctgtgg
attatcctctccagctcgctgtgccgcatggtcgacggacagatgaagatctcaccggaa
acggtgcaaaagtgggctgtgtccttcagcaaagagatagctgctctgtccgccagatac
tctggagctaaactgctgcagaagaaatacaaggatgtggaggcagtggtgaagatagag
gaggtggacggagaggagctggtgaagaagtttgctgaggagatggaggagatgcttggg
aggaagatgaaatctgtgaagaggttagcagaagcagcggaggatgctgacctttaccac
gagtacaacgaaactctagagtttgaatactttaactccatgctgatcaacaaggtggat
gaggatgggaattcactgtcgctgggaggagagttcactctggagaaaaacgaacacttc
aataagctgccagtcaacacgcaactgagtaacattcaagtccctacaaatgtttacaac
agagatacagatattgtgaacggagcctacatgtctgaggctctgaatgacgtattcatt
gataacttcaagaaagatccaactctcacctggcagtactttggcagcgctacaggcttc
ttcaggctctacccagggatccagtggattccagatgaaaatggtgttgtcacctttgat
tgcaggaacagaaactggtatatccaggcagccacatcacctaaagatgtagtaatcgtg
gtggatgtgagtggcagtatgaagggactacgactgaccatagccaaacacaccatcaat
actatactggacacactgggagaaaacgactttgttaacatcattgcatacagtgactat
gttcgctacgtggagccctgcttcaagggcacgctggtacaagctgatctggataacaga
gagcatttcaagcttttggttgatgaacttcatgtcaaaggcgagggcaaagtgaaaatt
gcgatgaaggagtcttttaagatcctcaacgaggttgcagcactgggccagggcagcctg
tgtaaccaggccatcatgctgataacagacggagccatggaggacttccaggatgttttt
gaagagttcaactggccagaacgacgggttcgagtgttcacctatcttattggccgagag
atgacatttgctgacaatgttaaatggattgcctgcaacaacaagggttactacacacac
gtctccacgctggctgatgtccaggaaaacgttatggagtatctccatgttctgagccgg
ccaatggtcatcaaccacgatcacgacatcatctggactgaggcctatatggacagtgtg
ctgttcaacactcaggcccaaagcctcctgctgatgacctcagtagccatgcctgtgttc
agcaaaaaggaagagactttgtctcatgggattctgctgggagtggtagggacagacgtg
gccttgagagaactgatgagattagctcctagatacaagctgggtgtacatggttacggc
taccttatcaccaacaacggctacatcctgtctcatcctgacctacgacctctgtataaa
gaggggaagacgctgaagccaaaacccaattataacagtgttgatctggcagaggtggaa
tgggaagacacagaggagaaactgaggacagccatggttaaaggagaaactggaacgttg
tctttagacgtgagaacttcagtggataaaggaacgagggtgatgttcctgaagaatgat
tacttctacaccgtcatcaatgagacaccgttcagtctgggtatcgtgctgaccagagga
tatggagagtatatcttcatcggaaacgtctctgttgaggagggtcttcatgacttactg
gctccagacctgaccatagccagtgaatggacctactgtgagacagacattgacccggcc
caccgtaagctgacccagctgcaggctgtggtgcgatacctcactggcaaagaacctgat
ctggattgtgatgtacagttgttgcagcaaactctttttgatgctgtggtcacggctcct
atggaagcctactggaccgctctaatgctgaacgcatctggtatggaggagggtgtagaa
acagcattcatggggacccgatcaggcctgatgagattccagagatacgctggtgttgag
aaaagagttgggaagtctttcctgacctccacagacaaggagaatatgttcacgttggac
catttcccagtgtggtaccgcagagcatccgagaacccagctggacagtttctgtactac
atgcccaggcaggagacaagagcagggaggatagtgatcgccaccacttctgtcactgtg
acggtgggcaagaaaactgccatcgctggagccatcggtatccagatgactctggatgtg
ttggagtctaaattctgggccattgcagcacagccaaatgacacagattgctctgacgta
gatgggatttgtcctcttcggtgtgacagcgttgatattgcatgctacatgattgacaat
aatggctttgtcctaatttctaaacagcgcaatgatgcgggtagattttttggcgagatt
gacggatcagtaatgacaacactaatcagaatgggcatgttcaaaagggtgtccttgttc
gactaccaggccatgtgtaagatgaactcgcactctgtcagcagcgcccgtccacttctc
agtccgttttatggtttggcttcagccctcaagtggttcctctccaacttcctactgttt
ctcctggagtttaatttctgtggcttttggcacacggagcattttgctgacgccaaggca
tctttcagcgtgtcctcggctcataagaaaagaggggacattcttcagccgtgtgacacc
gagtaccccagctttgtctacgagccgtcagtcaaagagaccaacagcatcattaagtgt
ggacgctgccagaagatgtttgtggtgcaacagataccagacagcaacctgttgatgctg
gtggtgcaggcggactgtgactgctccaaacagtacccacccatcaccatggagcccaag
gaagtcaaatataatgcctcagtgaagtgtgacaggatgaggtcccagaagatccgccgc
cgccccgagtcctgccacgcctaccacccccaggagaacgccaatgactgtggaggagct
tctgttatatctctctctgcatctctcttcctcgcctgcctctccttctccacacgtgtc
tcctga
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