Trematomus bernacchii (emerald rockcod): 117484915
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Entry
117484915 CDS
T09643
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117484915 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117484915 (arid2)
03021 Transcription machinery [BR:
tben03021
]
117484915 (arid2)
03036 Chromosome and associated proteins [BR:
tben03036
]
117484915 (arid2)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
ARID
117484915 (arid2)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117484915 (arid2)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
117484915 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Pox_D5
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
117484915
NCBI-ProteinID:
XP_033989286
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSPFRKIPIVGGKELDLNALYIRVVSLGGF
AKVSDKNQWIELGDEFHLPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDEETQPGNPKN
LLPIGAIPSSYNYQQHSVSDYLRQSYGLSLDLVPPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHSMQLDKEPKLVTLLLAHAGVFDDSLGSFSGVFGADWKEKTSRDFVRFWKDV
VEDDEVRELIWDKNSRAQEGTSCEGRWQSLFHPPRNSGISDMEAQRVLQIAVILRNLSFD
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTV
TKCLMSRDRFLKMRAMEILGNLSKAEDNSVLICEYVDQDSYREVIMLLTLPDLMLLMASL
EVLYLLAQLGEIPCSKIASVDHSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANAEQATE
VRPQLVEQVPAAVQGASAPGTRVPVQSAQPPPGIVELDGEKFILQWLNAHFETNSDGAVS
RSEMYSEYLSTCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQEESKSNGQVHILLVGLRR
RAIPLPIQLYYQQPQQQQQSPAAAATPPAARHMAPGDPQATPTGLPLGPPGLGPQFVRVL
NPSISTAAAAQEAPHANHPTVSRHPASPPVPINPLAAAQQVRPGPVVQIPTSTPGTQNHS
PQNPGAPPTAQLHSPMLPTGTPVTLFQQVPQGHILTARVQGVCPPQVEAPSSSIQLGHGQ
MPNSQGSRGTFQNIAPKPAPGAAGPAAGPSQQQQSVVLVNPQQSQAFNPAIHQIVLTNPS
AVPGAQTIQIAGQTGVSSPCPPPTTNQTVSQSLSMKRQQQLQMIPQPPPPQPTSTESSLI
KQLLLPKRGPSTPGGKLILPAPQVPLPNSTLAPSPQAMYQPSYSSQNPSPQQLNVQLLPG
QLLSTSSSGAATIIQGPPAAGQVTFTVVPNTSFPSSAAAVSQGAVAPGVPPPPSSTASVP
PHAPAAQPPPLPAPLRGDKIICQKEEEAKDATGLHIHERKIEVMENSSLGEGKTSNGDVA
GGAKLLNGRKCMESNLPPYHSGNSQEALNGPTTEAHPANGKQVLSPSTNPLEGNPDPKKT
LVNGVCDFDRVDGGGNLNKNIPNHIASKQYFGNGQVGPTEKSHGSDPPPPSPPPPQQDTA
KAQQAERLANGPQAVGNRPPSELTNGPMGPGHNVPVLRQQLLPSSTLPPTVTVTSQGPAN
GMPSEARGLKRPAESEDRSAASSGIPNKVGVRIITISDPNNAGSSSTMVAVPAGTDPSTV
AKVAIENAAQQRNCSPTLTAGLTPAVTPPVSQPGGNHSPAQQSPAAPPEQTRKAGHNFKC
LWQSCKRWFETPSQVFYHAATQHGGKGVYGGHCQWEGCEPFPRQRLSLITHLQDKHCSRE
ALLAGLKLEEQQAQSPNQSTSQTPPAAGSTPTPRPPKAIVNHPSAALMALRRGSRNLVFR
DFTDEKEGPVTKHIRLTAALTLKNIAKHSDGGRMLVKRHETHLSVLALSNMEVSTTLAKC
LYELTRALQA
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctactagatcagcgaaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccaaagcagaggatcgccgttcagaaagattcctatcgtg
ggtggtaaagagctggatctgaatgctctctatatcagagtcgtatctttaggaggattt
gctaaggtctccgataaaaaccaatggattgaacttggagacgagtttcacttgccaagg
agttgttccaacgctgcatttgctttaaaacagtactaccttcgatacttggagaaatat
gagaaagtccaccacttcggtgaggatgatgaggaaacgcagccggggaatccaaaaaac
cttcttccaatcggtgcaattcccagctcttataactaccagcaacacagtgtatcagac
tatctccgccaaagctatggactgtctttggatctggttccgccgtgcgactacaacaaa
ctggtgctgtctctcctctcgggcctacccaacgaagtggacttcgctgttaacgtttgc
acgctgctttccaacgagagcaagcactccatgcagctggacaaagaacccaaactggtg
acgctgctgctggcccacgccggcgtcttcgacgactcactaggcagcttctctggggta
ttcggggcggactggaaggaaaagacctcccgggactttgtcaggttctggaaggatgtg
gtggaggacgatgaagtcagggagctgatctgggacaagaacagtcgggcacaagaaggt
acgtcgtgtgaagggcgctggcagagcctcttccacccgccgcggaactcgggcatcagc
gacatggaggcgcagcgggtgctgcagatcgccgttatcctgcggaacctctcattcgat
gaggccaatgtcaagctgctggcggccaaccgaacgtgcctgcgcttcctcttgctctgc
gcccactgtaacctcatctcactccgacagctcggactggacacgctgggcaacgtggct
gccgagctccagctggatcccgtggactttcggacgactcatctgatctttcacaccgtc
accaaatgtttgatgtccagggaccggtttctcaagatgagagccatggaaatcctgggc
aacctcagcaaggccgaggacaacagcgtgcttatctgtgagtacgtggaccaggactcg
tacagggaggtaataatgctcctcaccctgcctgacctcatgcttctcatggcctctttg
gaggtgctgtacctgctggcccagctcggagagattccctgcagcaagatcgcttccgtc
gaccatagcatagacttgttagtgcggctagtgtcggtcgaccttcatacgttcggaccc
gacgctctcacggcggtgcggttgatcgagcatcaggccaacgcggagcaggcgaccgag
gtccgaccccagctggtggagcaggtccccgcagccgtgcagggagcatcagcgcctgga
acgagggtcccagttcaatccgcccaaccaccaccgggtattgttgaactagatggggaa
aagtttatactgcagtggctgaacgcacactttgagacaaactccgatggcgccgtgtca
cgatcagaaatgtactcggagtacttgtccacatgcagtaaaatgggacgaagcaacatc
ctgaactccacaggcttcctcaaatgtctgcgcactgtgtttcccaaccacacgatgcgg
cggcaagaggagtccaagtccaacggtcaggtccacatcctgctggtggggctgaggcgc
agggccatccccctgcccatccagctgtactaccagcagccgcagcagcagcagcagagt
ccggcagcagctgcaacccccccagcagcccgacacatggctcctggagaccctcaggcc
acgccaacaggcttacctctcgggcctcccggtcttggaccccagtttgtgagggtcctc
aaccccagcatcagcaccgctgctgctgcacaggaagctcctcatgctaaccacccgact
gtttcccgccaccccgcgtctccgccggtacccatcaatcctctggcagcagcccaacag
gtccggcctggtccagtggtccagattccaacgtcgacaccaggcacacagaaccacagc
ccgcagaaccctggggctccccccacggctcagctacactcacccatgctgcccacaggg
acgcctgtcacgctctttcagcaagtaccgcagggccacatcctcaccgccagggtgcaa
ggggtgtgccccccgcaggtggaggcaccctcttcttccatccagttgggacacggtcag
atgcccaattcccaggggtcacgaggcacatttcaaaatatcgcccccaaaccagcacca
ggggcggctggaccagcagccggtcccagccagcagcagcagagtgttgtcttagtcaac
ccccagcagagccaagcattcaaccccgccatacaccagatagttctcacaaacccctcc
gctgttcccggcgcccagactatccagatagcagggcagactggagtttcaagcccctgc
ccgccccccactacaaatcaaactgtcagccagtcgctgtcaatgaagcggcagcagcag
ctccaaatgatcccgcaacctcctccccctcagcctacctccactgagtctagcttgatc
aaacagctactgcttccaaagcgagggccctccaccccgggaggaaagctcatcctaccc
gctccccaggtaccccttcccaacagcacgttagcccccagtccacaggccatgtaccag
ccgagctacagtagccagaatccctctcctcagcagctcaatgtccagctgttgccaggc
caactcctctccaccagcagctcaggggccgcgaccatcatccagggccccccggcagcg
ggacaagttacattcaccgtggtccccaacactagcttcccctcctccgctgctgctgtc
agtcagggtgccgtggctcctggtgttccccctcctccatcctctactgcctcagtgccc
ccccacgccccagcagctcagccaccaccactgccagctcccctcagaggagacaagatc
atttgtcaaaaggaggaggaggccaaggacgccacggggctgcacatccacgagagaaag
atagaggtgatggagaactcgtctttgggagaaggcaaaaccagtaatggcgacgtggcg
ggaggcgccaagctgctaaatggtaggaagtgcatggagtctaatctacctccataccac
tcagggaacagccaggaggcgctcaatggcccgacaacggaggcacaccctgctaatggt
aagcaggttctctcccccagcaccaaccctctggagggaaaccccgaccccaaaaagacc
ctcgtcaacggggtgtgtgactttgatcgggtagacggtggtggtaacttaaacaaaaac
attccaaatcacattgcttccaaacagtactttgggaacgggcaggtgggccccactgag
aagagtcacgggtcagacccccctcctcctagtcctccgcccccccagcaggacactgcc
aaagcccagcaggccgagcgcctcgctaacggaccccaggcagtaggcaacagacccccc
tcggaattaaccaacggacctatggggccaggccataacgtgcctgtgcttaggcagcaa
ctgctccccagctccaccctcccccccaccgtcactgttacctcccagggtcccgcaaac
ggcatgccctcagaggctcggggtctcaagaggccggcggagagcgaggaccgcagtgcg
gcgtcctcggggatccccaacaaggtgggggtgcggatcatcaccatcagtgaccccaac
aacgccggcagcagctccaccatggtggcggtgccagcaggaacagacccaagcacagta
gccaaagtagcaatagagaacgccgctcagcagaggaactgctcgcccacgctgacggcc
ggcctcacgcctgcagtaacgccgcctgtatcgcagccaggaggaaaccacagcccagca
cagcagagccccgcagcccccccggagcagaccaggaaagctgggcacaacttcaagtgt
ctgtggcagtcctgtaaacggtggtttgaaacgccgtctcaggtgttttaccacgcagcg
acgcagcatggtgggaaaggcgtgtatggaggccattgtcagtgggaggggtgtgaaccc
tttccccggcagagactgtccctgatcacacatctacaggataagcattgttctcgagag
gctttactggctggactcaaactagaggagcagcaggcacaaagtcccaatcagtctact
tcccagactccgccagcggcaggcagtactccgacaccgcgaccaccgaaggccatcgtg
aatcatccaagcgcagctctcatggctcttcgtagaggctctcgaaacctggtcttcagg
gacttcactgatgagaaagagggaccagtgaccaaacacatccgactaactgctgcctta
acgttaaagaacatcgccaagcactctgacggcggtcgcatgttggtaaagaggcatgag
acgcacctctccgtgctcgcgctaagtaacatggaggtttccaccacgctcgccaaatgc
ctttatgaactgacgcgcgctctccaggcttaa
DBGET
integrated database retrieval system
