Trematomus bernacchii (emerald rockcod): 117485052
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Entry
117485052 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-beta-1-like
KO
K27096
liprin-beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117485052
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117485052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
117485052
NCBI-ProteinID:
XP_033989537
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKAMDYNNGLFDCQSPTSPFLGGLRVLHLLEDLRGMLE
LMDNEEKDNLRCQIPDSTAEGVAEWLQGRLTNGHGSEAIYQERLSRVESDKECLVLQVSV
LSDQVEVQGEKIRDLENCLDHHQEKRNATEELLQHELLTRSTLETQKLELMTEVSCLNMK
LTAVERDHRENEGLYQEVTDLRFRVTDIENDRLQCEKKLKATKEELLLLQTQLEEREAEL
RRLKEESRLRMESHNRAEGGEGDTEVLNMKRVLESLASANDVKERRIKELEESLTKSKKV
QELIIEKLKEDDYDDIADDPSVSVSMEVDQDSLALGGEAGRSSGESIPCIAVLSEMNDLD
RERELQAAHSSSDIPQPDSSAFSSEQAKNKAALGSSSPIRAGDETFGSKKARSSFGRGFF
KLRGGKQTTSSPNLDRSRSASAPALAETERKGTDHLDLAGVPPKKPQDALPCSPETKKKS
KGFMKFFGRLKRSHSTSFNLDDAETEFRRGGVRATAGPRLGWSRESKHSAVDVPFSRWSR
EDVCAWLHEQGLGLYVAPGQSWIKSGQTLLRASQHDLEKELCMKQPLHRKKLLLALQALG
SEEDYLKCRLDHNWVTRWLDDIGLPQYKSHFDEARVDGCMLHYMTVEDLLSLKVGSVLHH
LSIKRAIQVLRLNGYAPNCLRRRPSDENNMTPAEISQWTNHRVMEWLRSVDLAEYAPNLR
GSGVHGGLMVLEPRFNVEALALLLNIPSNKTLLRRHLATHFHLLVGSEAQRLKQDCLENP
DYCVLTATAKVKPTRLSFGGFGTLRKKRHDDGEEYVCPMNVEMPKSSSFQMGGQIYEEPL
DHLEQMEDSEGTVRQIGEFSEEINNLTSMLKEDEFFHEISVDAEEHDHISGV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggacgccagcgatatgttggcagcagccttggagcagatggatgggatcatt
gcaggctctaaggccatggactacaataacgggctgtttgactgccagtcgcccacttca
cctttcctggggggcctccgggtgctgcacctgctggaggacctgcgcgggatgctggag
ctcatggacaacgaggaaaaggacaacctgcgctgtcagattcctgactccactgcagag
ggggtggcagagtggctgcagggacgattgactaacggtcacggctcagaagcaatctac
caagaacgtctgtcacgagtggagagtgacaaagagtgtcttgttcttcaggtcagtgtt
ctctcagatcaggtggaggtgcagggtgaaaagatacgggacctggaaaactgcctcgat
catcatcaggagaaacgaaatgctactgaagagctgctgcaacatgagctgttgacccgg
tccactctggagacgcagaagctggagctgatgacggaggtgtcctgtctgaatatgaag
ctgacggctgtggagagagaccacagggagaatgagggcttgtaccaggaagtaacggac
ctgcggttcagggtgactgacatagagaatgacagactgcagtgtgagaagaaactcaaa
gctaccaaagaggagctgctgctgctgcagacgcagctggaggagcgagaggcggagctg
aggaggctgaaggaggagagcaggctgaggatggagagccataacagagcggagggagga
gagggagatactgaagtgttgaacatgaagagggtgttggagtcactggcgtcggccaac
gatgtgaaggaacgaaggataaaggagctggaggagtccctcacaaagagcaagaaagtg
caggagctgatcatagagaaactgaaggaagatgactacgacgatatcgcagatgatccc
tcggtctctgtttccatggaggtggatcaggactcgctggcgttgggaggggaggcagga
agaagctctggagagtccatcccttgtatagcagttctgtctgagatgaatgatctggac
agagagcgagagttacaggcggcccacagttcctcagacatcccacagccggacagctcg
gccttcagcagcgagcaggccaaaaacaaagcagccctgggttcctcgtctcccatcaga
gccggtgacgagaccttcggctcgaagaaggcccgctcctctttcggccgcggcttcttc
aaactgcgaggaggcaaacagaccaccagctctccaaacctggaccgcagccggagtgcc
agtgctcctgcgttagctgagacggaacgtaaaggcacggatcatctggacctggccggc
gttcctcctaaaaaacctcaggatgctcttccctgctcacctgaaaccaagaagaagtcc
aagggcttcatgaagttcttcggcagactaaagcgcagtcactctacatccttcaacctg
gatgatgcagagacggagttcaggagggggggggtccgagccaccgccggcccgaggctg
ggctggtcccgcgagtccaagcacagtgctgtggacgtccccttctcccgctggagcaga
gaggacgtgtgtgcctggctccatgagcagggcctcgggctgtatgtggccccggggcag
agctggatcaaatcaggacagacactcctacgggcttcacaacacgacctggagaaggag
ctgtgcatgaagcagcctctccacaggaagaagctgctgctggctctgcaggctctgggc
tccgaggaggactacctcaaatgcagactggaccacaactgggtgaccaggtggctggac
gacatcggcctcccgcagtacaaaagtcactttgatgaggctcgtgttgacggctgcatg
ctgcactacatgacagtggaggacttgctctctctgaaggtgggcagtgtcctccatcac
ctcagcatcaagagggccatccaggtcctccgcctcaacggctatgcccccaactgtctg
aggagacggccctctgatgagaacaacatgacaccagcagagatctcccagtggaccaac
cacagggtgatggagtggctgcgctccgtggatctggccgaatacgccccgaatctgagg
ggaagcggtgttcacggaggactgatggtgttggagccgcgcttcaacgtggaggcgctc
gccctgctgctcaacatcccctccaacaaaaccctgctgagacgccacctggccactcac
ttccacctgctcgtcggctccgaggcgcagagactcaaacaggactgtctggagaacccc
gactactgcgtgctcaccgccacggccaaggtcaagcctacacgcctgtcattcgggggt
ttcggcactttgaggaagaaacgccatgacgatggcgaggagtacgtgtgccccatgaac
gtggaaatgccaaagagcagcagcttccagatggggggccagatctacgaggagcccctc
gaccacctggagcagatggaagactctgaagggaccgtgagacagatcggagagttttct
gaggaaatcaacaatctgacgagcatgctgaaggaagatgagttctttcacgagatatct
gtcgacgcagaagaacacgatcacatctccggtgtttga
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