Trematomus bernacchii (emerald rockcod): 117485078
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Entry
117485078 CDS
T09643
Symbol
hgfa
Name
(RefSeq) hepatocyte growth factor a isoform X1
KO
K05460
hepatocyte growth factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117485078 (hgfa)
04020 Calcium signaling pathway
117485078 (hgfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117485078 (hgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117485078 (hgfa)
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117485078 (hgfa)
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Growth factors (RTK binding)
117485078 (hgfa)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117485078 (hgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
DUF1986
Motif
Other DBs
NCBI-GeneID:
117485078
NCBI-ProteinID:
XP_033989571
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MRINVWIYQAVACVVATILDTGFCKRTRQSLQKYEKSEGHMLVCTDCPQLPLVRGSRSLE
NCARKCKKVKKNFNCRAFNFQRHDRKCHLLPFDRFTHGVQTQANVNFTLYEKKDYIRECI
IGTKDNYRGRRSWTKSNITCQAWSDNNINEHTFSPDRYPTQDLRENFCRNPNNDPGGPWC
YTTDPNVRAEECGLPQCSQEVCITCNGEDYRGKMDQTESGKECQRWDSTRPHKHHFQPKK
YRQKDLKDNYCRNPDNRLRPWCYTVDPKTPWEYCNISVCDSDSSEDTDVNVTTSCVQGKG
TDYRGTMNVTPEGVTCQRWDSQSPHNHSFLPQNFKCNLCMCFRDLTENYCRNPDGADHPW
CFTTDPNQRIANCTHIPRCDAEATQKIECYESGETYRGTLSITRSGIPCADWSHHINSGD
SHSTESHVGLERNYCRNPDRDKHGPWCYTNPNNRLAWDYCKLKHCESATVSPQPNTPTDT
KISCFVHINTRIVGGHQVRGTDGSWVVSIQREKVHLCGGSLIREDWVLTDQQCFTSCVPD
LKDYSVQVGVRHLNESSNHPGLRISRLICGPEGSNLVMLKLEDPAPVSEGASTIHLPVKE
CHIPEGTNCTMYGWGETKNTGYDEALNTLTMPMVNNEMCSQIKGDAGESRICAGGKRGEG
VCDKDNGGPLVCQEHERKVIIGVSIQRTKCASSQPALFVNVAFYSEWIYKVFKLYPSLER
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaggataaacgtttggatttaccaagctgtggcgtgtgttgtggccactatattggat
acaggtttttgtaaaaggactcgtcagtcgttacagaagtatgagaagagtgaaggtcac
atgctggtttgcacagactgccctcagctccctttggttagaggcagccggtcgctggaa
aactgcgcccgcaagtgcaagaaggtcaagaaaaacttcaactgcagggcttttaacttt
cagcggcacgacaggaaatgccacttgcttccttttgaccgcttcacccatggtgtgcag
acgcaagccaacgtcaactttactttgtatgaaaaaaaagattatataagggaatgtatc
atcggcaccaaggacaactacagagggagaagatcttggacaaagtcaaacatcacttgc
caagcttggtcagataataacatcaatgaacacacgttttctcctgataggtacccaacg
caagacctgagggagaacttttgtcgaaatcccaacaacgatcctggtggtccgtggtgc
tacactacagatcccaacgtacgagccgaggagtgtggcctgccacagtgttcacaagaa
gtctgtattacgtgcaatggtgaagattaccgggggaaaatggaccaaacagagagtggc
aaggagtgccagagatgggactcaacaaggcctcacaaacaccacttccaacccaaaaag
tatcgacagaaagatttaaaggacaactactgccgtaacccagataatcgccttcgtccc
tggtgctacacggtggatcctaaaactccgtgggagtactgcaacatctctgtgtgtgat
tctgactcaagtgaggacacagatgtcaatgtaacaacatcctgtgtccagggaaaagga
acagattaccgaggcacaatgaatgtcactccagagggtgtgacatgtcagcgctgggac
tcccagtcgccccataaccactcctttcttccccagaacttcaaatgcaatttgtgtatg
tgttttagagacctcacagagaactactgccgtaaccctgatggcgccgatcacccatgg
tgcttcactacagaccccaatcagaggatagccaactgcacccacatccccaggtgtgat
gctgaggccacacaaaaaatagagtgttatgaaagcggagagacgtaccggggcacgtta
tccataactcgatcggggattccctgtgcagactggtctcatcacataaacagtggggat
tctcactctacagaatcccatgtagggctggagaggaattactgccggaacccggaccgg
gacaaacatggcccctggtgttacactaatccaaataaccgtttggcctgggactactgc
aaactgaagcactgtgaatcagccacagtgtctcctcaacccaacactccaacagacacc
aagatatcatgctttgtgcatataaacaccagaatagttggaggacaccaagtgcggggt
acagatggcagctgggttgtaagcatccaaagagagaaggttcatttgtgcgggggctcg
ttgatcagagaagattgggttttgacggatcaacagtgcttcacctcctgtgttccagat
ctcaaggattacagtgtgcaggttggagtgcgccacctcaacgaatcctccaaccacccg
ggactacgcatctctcgcctgatttgtggccccgaaggatccaacctggttatgctaaaa
ctagaagatcctgcccctgtgtctgaaggtgcctctacaattcatcttccagtgaaagag
tgtcacatccctgaaggcaccaactgcaccatgtatggatggggggaaaccaaaaacaca
ggatacgatgaggcgctgaacacactgaccatgcccatggtcaacaacgaaatgtgctca
caaatcaaaggggacgctggagaaagcagaatatgtgccggcggcaagagaggagaaggc
gtatgtgataaagacaatggtggtccattggtttgccaggaacatgagcgtaaagtgata
attggcgtgagcatccaaaggacaaaatgtgcgtcatcgcagcctgcgctctttgttaac
gtcgctttctactctgagtggatatacaaagtgttcaaactttaccccagtttggagagg
aactga
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