Trematomus bernacchii (emerald rockcod): 117485254
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Entry
117485254 CDS
T09643
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117485254 (prom1a)
04090 CD molecules [BR:
tben04090
]
117485254 (prom1a)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117485254 (prom1a)
CD molecules [BR:
tben04090
]
Proteins
117485254 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Cyt_bd_oxida_II
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
117485254
NCBI-ProteinID:
XP_033989706
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MWRTGVLLLLLAVFLASGELQLETEPRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGILF
HLVQAFLYVVQPNEFPEDLLVKLAKEKFGAIQTEYQKPENIVLTLQAIYYEIGFVVCAAL
GLLFAVLVPIIGIFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLC
AYAANQNLSSQVKNIRRLVNSNMRDLHTFVNDTPMQIDYLISQYATAKNKVIYDLDNIGP
LLGGRIHDQLDKEVHPALDRVLNMAGAMRETKEALENVSVGLEVLQEGTGKLNFNLSLVR
TSINRTLSDPGCHDEESDATSAQLCRNIRQSLSQLQIGANFTRLPKVNDQLEKMNDVMRT
DLSAIVQKGYSSLNDTPNMVIEQTRSVVESVQGLMDGIGNNISSFSKVFPVQSCLSNFTI
AISHAHAKIEEYYPEIDKLDFYRWIGCIALCCMVVLVLAFNYLGLLCGTLGYDKHASPTT
RGCISNTGGTMLVAGVGFSIIFSLVLMGVVTVMFLLGGNMEKLFCEPFHTKEVFKVVDTP
YLVNPEWKNFIPGYMYNDSDLELTAESLYSTCKENKGIYSAMRLDKLFNISSFLNSTVFT
KDVVSQLESVKIDLRGIIMLEAEGKQNLVDFSDAGLSEINYADYLEEVNKGVTVMDLLTY
ARELEAQTDLMPRGGLQSSLKGHIGTLRQIHAQQIIPMEQAMKYVRARSALNQSMRFLER
TASDLPNKVLAVLEAIEAAQYLISQNATQLINQETGKYTATIVGYFNQYIEWVKTSLALE
VAPCKPFSNMLDTAEIITCSFVVDSMNTFWMGLGCSALFLLPSIILAVKLAKFYRRMDTE
DVYDDIETMPMKTIPTYDTMNRFPRASAPPRHIDW
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggaccggggtcttgctgctcctcctggccgtgtttctagcctccggagaactc
cagctggaaaccgagccgcggagactccctcctccgggaaagttggatttcggttatgtt
cctgcaggagtttacgagactcttgcccattacgaaccgggaccgatagggatcctgttc
cacctggtgcaggcgttcctgtatgtggtgcagcccaatgagttccctgaagatcttctt
gtcaagctggcaaaggaaaagtttggggccattcagacggaataccaaaagccagagaac
atagtgctgactcttcaggccatctactatgagatcggcttcgtagtttgtgcggcgctc
ggcctgctgttcgccgttctggttccgataatcggcatcttcttctgcatgtgccgctgc
tgcgataactgcggcggcgagatgcaccaacgccagaggaaaaacgcagactgtcgacga
ggcctgctgggaactctgctcttctccacctcactggtcatcacgatcggagtgctgtgt
gcctacgctgccaaccagaacctgagctctcaggtgaagaacatccggagattggtgaac
agcaacatgagggacctgcacaccttcgttaatgacacgccaatgcaaattgattaccta
atatcccaatacgccacagccaagaacaaagtcatctatgacctagataatataggtcca
ttattaggtggaaggatacacgatcagctggataaggaggtccatcctgcattggacaga
gttctcaatatggctggagctatgcgagagacaaaggaggctctggagaacgtcagcgtg
ggtctggaggttctccaggaaggaacagggaagctcaacttcaacctgagcctggtccgg
accagcatcaaccggacgctcagcgacccgggctgccacgacgaggagtcggacgccacc
tccgcccagctgtgccgaaacatccgccagtccctgtcccagctgcagatcggagccaac
ttcacacggctacctaaagtgaacgatcagctggaaaaaatgaacgatgtaatgagaacg
gacctcagtgcgatcgtccagaagggctactcctctttgaacgacacaccaaatatggtg
attgaacagaccagaagtgttgttgagagtgtgcaaggtttgatggacggcattggaaat
aacatcagcagcttctccaaagtgttccctgtgcagagttgcctttccaacttcactatc
gctatcagccatgcccatgccaagattgaggagtactaccctgaaattgacaaactggat
ttctacaggtggattggctgtattgctctgtgctgtatggtggtcctggtcctggccttc
aactacctgggcctgctgtgcggcactctgggatacgacaaacacgcctcacctacgaca
cgaggctgcatctccaacacaggaggaaccatgctcgtggccggcgttggattcagcatc
atcttctccttggtgctgatgggagtggtgactgtcatgttcctgcttggaggaaacatg
gagaaacttttctgtgagcctttccacaccaaagaagtcttcaaggttgtggacacgcca
tatctggtcaacccagagtggaagaacttcatcccgggctacatgtacaacgactcggac
ctggagctgacagcagagagcttgtacagtacttgcaaagagaacaaaggcatctactca
gccatgcgtctggacaaactcttcaacatctcctccttcctgaactctacagtgttcact
aaggatgtggtgagtcagctggagagcgttaagatcgacctgagggggataatcatgttg
gaggccgaggggaagcagaacctcgtggatttctctgacgcagggctgtcagaaatcaac
tatgcagactacctggaagaggtcaacaaaggagttacagtgatggacctgctcacatat
gccagagagctggaggcgcagacagacctcatgcccagaggcggtctgcagagctctctg
aaaggtcacatcggcactctgcggcagatccacgctcaacagatcatccccatggagcag
gccatgaaatatgttagagcgaggagtgcattgaaccagagtatgaggttcctggagaga
acagcttcagacctgccaaacaaagttttagcagttcttgaggcgattgaagcggcccag
tacctcatctcccagaatgcaacacaattaatcaatcaggaaacgggaaaatacacagcc
accattgttggctacttcaatcaatacatagagtgggtcaaaacttcactggccttagag
gtcgcaccgtgcaagcctttcagcaacatgctggacacggcggagatcattacttgcagt
tttgtggtcgactccatgaacaccttctggatgggcctgggctgcagcgctctcttcctg
ctgcccagcatcatcctcgctgtgaaactagcaaagttctaccgcaggatggacacagag
gacgtttacgacgacattgagacaatgcccatgaaaaccatccctacctatgacactatg
aacaggttcccgcgggcctcggctcctccgaggcacatcgactggtga
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