Trematomus bernacchii (emerald rockcod): 117485350
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Entry
117485350 CDS
T09643
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117485350 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117485350 (nob1)
03051 Proteasome [BR:
tben03051
]
117485350 (nob1)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117485350 (nob1)
Proteasome [BR:
tben03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
117485350 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
RPA43_OB
DZR_2
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
117485350
NCBI-ProteinID:
XP_033989752
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MAPTLVAHVVADAGAFLKKAPLQEIGSTIYTLKDVVDEIRDKPTRRSLAFLPYHLTFREP
YPEHIRHVTEFSKKTGDYPSLSATDIKVLALTYQLELEHVGSKHLKKEPEVKVNVHSTQR
HPETPVNVAGFFLPSREKKSSESVGVRQKFPEGDPFNSFQFWRPALPTVDKELLQLLDPL
EVSDPKETSSDSFNTFNSFQFWRPPLASIDSLMHLLNLDDVSSSDQRSDEDKENEPEEEE
DDEEEDEEEEEEGDGGWITPGNIKQVKMDSSDWTAPADVTVGCLTTDFAMQNVLIQIGLH
VLSVNGMLIRQARNYILRCHACFKTTSNMSKLFCAHCGNRTLKKIAVTVSADGNTQMHFS
KNPKVLNSKGLRHSLPMPQGGKHGNNPQLVEDQRFPQQRLSRKARQKTNVFDPDFVTGAS
PFSQNDIYSRAANLQIRDGQGGGGRRRANPNAAHKKFVKKN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctaccttggttgcgcatgttgtcgcagacgcaggagcttttctgaagaaagct
cctctccaggagatcggcagcacgatctacaccctgaaggacgtggtggacgagatcaga
gacaaacccacgaggaggagtttagctttcctgccgtaccacctgaccttcagagagccg
taccccgaacacatcagacacgtgacggagttctccaagaagacgggagactacccgagt
ctgtcagcgaccgacatcaaagtcctggctctgacctaccagctggagctggagcacgtg
ggatccaagcacctgaagaaagagccagaagtcaaggtgaacgtccacagcactcagcgc
cacccggagactccggtcaatgtggccgggttcttcctgccctccagagaaaagaagtct
tcagagagcgttggtgtacgacagaagtttccggaaggagatccgttcaacagcttccag
ttctggaggccggcgctgccgaccgtcgacaaagagctgctgcagctgctggatcctctg
gaggtttcagatcccaaagagacgtcttcagattctttcaacactttcaactctttccag
ttctggaggccgccgctcgcctccatcgactctctgatgcacctgctgaatctggacgac
gtttcttcatcagatcagaggagcgacgaggacaaagagaacgagcctgaagaggaggaa
gatgatgaggaagaggatgaagaggaagaggaggaaggtgatggaggatggatcactccc
ggtaacatcaaacaggtgaagatggactcttctgattggacggctcccgctgatgtcaca
gtcggatgtctgaccaccgacttcgccatgcagaacgttctgatccagatcgggcttcac
gtcctgtccgttaacgggatgctcatcagacaggcgaggaactacatcctgaggtgccac
gcctgcttcaagacgacgagcaacatgagtaagctgttctgtgctcactgtgggaaccgg
accctgaagaagatcgcagtgaccgtcagcgccgacggaaacacacagatgcacttctcc
aagaacccaaaggtgctgaacagcaaaggactgaggcactctctgccgatgcctcaggga
ggtaaacacgggaacaaccctcagctggtggaggatcagcgcttccctcagcagagactc
tcccgtaaagcccggcagaaaaccaacgtgttcgacccggacttcgtcaccggagcgtct
cctttcagccagaacgacatctacagccgagccgctaacctgcagatcagagacgggcag
gggggcggcgggcggcggcgcgctaaccccaacgccgcgcacaagaagtttgtgaagaag
aactga
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