Trematomus bernacchii (emerald rockcod): 117485413
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Entry
117485413 CDS
T09643
Name
(RefSeq) protocadherin gamma-A10-like
KO
K16494
protocadherin beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117485413
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Protocadherins
117485413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
7TM_GPCR_Sri
Peptidase_S55
Bact_surface_Ig-like
MP_p6
Motif
Other DBs
NCBI-GeneID:
117485413
NCBI-ProteinID:
XP_033989861
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MMACLWIPARRGRWQALFVTLCLFELSSVAGQARYSVPEEQAEGSFVGNIARDLGLDVTR
LISGKARIITKGSRQYVDLNRDKGSLVIKERIDREELCGKTTPCSFSFELILENPIQLYR
VTVEVIDINDNSPSFPKEDINLKIVENAAAGTRFSLVSADDPDVGINDIQKYILKPSVHF
KLEVQIQPDGVQFIEMVLQTPLDREKEETHHLVLIASDGGEPHRSGTVRIHITVLDANDN
APVCSQPVYKAEVNENSPTGTVVTSVSATDSDKGVNGEVTYSIPHLAKEAKKLFDVNIKT
GEIKVAGNLDFEKSKTYQLNVQASDHGGYSDTCKVVIQIIDENDNVPTIQLMSFSNSISE
DSPPGTTIAVINVDDEDSDGNGVVKCSINSDIPFKMESSLTGYYTLVTEDYLDRESIPEY
NITITVSDQGSPPLTSSKNINIKVSDVNDSPPIFDQSEYSKTLPENNSPGFSVFTLSASD
ADWGQNARVSYFLEEKEINGAAVTSLVSVNSENGVIHAVRSFDYEQIKWFEFNITARDAG
SPPLSSVTTVKILIQDQNDNPPQILYPVQTGGSLVAEMVPRSADVGYLVTKVVAVDVDSG
QNAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVI
VNVVVADSFPEVLSEFTDFTQDKEYNDNLTFYLVLALAVVSFLFIMCLVVIISVKIYRWR
QSRIMFHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGTARSQNVLI
MDPSSTGTMQRIQSEKSILDEPDSPLEVRLI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttgtttgtggatacccgcgcgcagaggccgatggcaagcactgtttgtgact
ctttgtctgttcgagctgagctcagtagctggacaggctcggtactccgtaccggaagag
caggcagaaggctcttttgttggaaacatcgctagagatttaggtttggatgtgacgagg
ctcatatcaggtaaagctcgtattattaccaaaggaagccgacagtacgttgatttaaac
cgagataaaggcagccttgttattaaagaacgaatcgaccgagaagagctgtgtggaaag
acgacgccctgtagcttcagtttcgagctcattttagaaaacccaatccagctttaccgt
gtaacagtggaggttatagatataaatgataacagtccgtcgtttccaaaggaagatatc
aatttaaaaattgtagaaaatgctgcagcgggcacacgcttctctttggttagtgctgac
gacccggatgttggaataaatgacattcaaaaatacatacttaaaccctcggttcacttc
aaattggaagtgcagatccagcctgatggagtacaattcatcgaaatggttttacaaacc
ccgttagaccgggagaaagaggagactcaccatctcgtgctgattgcttcagatggaggg
gagccacacagatcagggacagtgcgcattcacatcactgtgctggatgctaacgataat
gcgccagtgtgcagccagcctgtttataaagcagaagtcaatgaaaactctcctacagga
acagtggttacctctgtgagtgcaactgattcagataaaggagtcaatggtgaagtaact
tattccatccctcatctcgccaaagaagcgaaaaagctttttgacgtaaatattaaaaca
ggagaaattaaagttgcaggcaatctggattttgaaaaatctaagacttatcaattaaac
gttcaggctagtgaccacggtggatattcagatacgtgcaaagttgttattcaaattatt
gatgagaatgacaacgttcctacaattcagctgatgtcattttctaactctatatctgag
gattctcctccaggtacaactatagctgttattaatgttgatgatgaagactctgatggt
aacggtgttgtaaagtgctcaataaactctgatatacctttcaaaatggagtcttcatta
acaggatattatactttagtaactgaagactacttagacagagaaagtattccggaatat
aatatcaccatcaccgtctctgaccaaggctccccgcctctgaccagcagtaaaaacata
aatataaaagtttctgatgtgaatgacagcccgcccatatttgatcaatcagaatacagt
aagactttaccggagaataactctccggggttttctgtttttactctgagtgctagtgat
gcagactggggtcaaaacgctcgtgtgtcttactttctggaggagaaagagattaatggg
gcagctgtgacttcgttagtctcagtcaattcagaaaatggggtcattcatgcagtgagg
tcctttgattatgagcagatcaagtggtttgaatttaacataactgctcgcgatgctgga
tcccctcctctgagttcagtgaccacagttaaaatactgatccaggaccagaacgacaac
ccccctcagatcctgtacccagtccagactggtggctctctggtggctgagatggtgcct
cgatcagcagatgtgggctacctggtcactaaagtggtggctgttgatgtggactctgga
cagaatgcctggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtg
ggcttacagaatggagaaataaggactatccgccaggtgactgataaagatgctgtgaaa
caaagactgactgttatagtggaggacaacgggcagccctctcgttcagctacagtcatt
gttaacgtggtggtggctgacagcttcccggaagtgctgtctgagttcactgactttaca
caggacaaggagtacaatgacaacctgactttttacttagtgctggctctggctgtagtg
tctttcctcttcatcatgtgtttagtggttattatatcagtgaagatctacaggtggaga
cagtctcgcatcatgtttcactccaatctccctgtgattccatattatcctccacgttac
tcagacactttggggacagggactctccaacacgtgtacaactatgaggtgtgcaggacg
actgactccagaaagagtgactgtaagtttggcacagcccggagtcagaacgtgctgata
atggaccccagttctacagggacgatgcagcggatacagagtgaaaagagcatcctggat
gaaccggactctcctctagaggttagactgatttaa
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