KEGG   Trematomus bernacchii (emerald rockcod): 117485504
Entry
117485504         CDS       T09643                                 
Symbol
fbxw11a
Name
(RefSeq) F-box/WD repeat-containing protein 11a isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04114  Oocyte meiosis
tben04120  Ubiquitin mediated proteolysis
tben04218  Cellular senescence
tben04310  Wnt signaling pathway
tben04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117485504 (fbxw11a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117485504 (fbxw11a)
   04340 Hedgehog signaling pathway
    117485504 (fbxw11a)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    117485504 (fbxw11a)
   04218 Cellular senescence
    117485504 (fbxw11a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117485504 (fbxw11a)
   03036 Chromosome and associated proteins [BR:tben03036]
    117485504 (fbxw11a)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     117485504 (fbxw11a)
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     117485504 (fbxw11a)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_C WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D WD40_Gbeta Beta-prop_SCAP WDR55 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 F-box-like ANAPC4_WD40 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_VPS8 WD40_like Beta-prop_HPS5 Beta-prop_IFT140_1st F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_WDR19_1st WD40_RFWD3 WD40_2 DUF6188
Other DBs
NCBI-GeneID: 117485504
NCBI-ProteinID: XP_033989952
LinkDB
Position
Unknown
AA seq 527 aa
MEPEMEDKTLELMNTSGMDSQTLVDDLSPKKTTVLKISNGPVAVSRKRPSEGNYEKEKEH
CIALFDQWSEADQVEFVERLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENI
LSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNR
TPEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIIS
GLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWEVTTGEVLNT
LIHHNEAVLHLRFANGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKY
IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC
LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV
FRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaacgttggagcttatgaacacgtcagggatggattca
cagaccctcgtggacgatttgtcgccaaagaagaccacagttctcaagattagtaatggt
cctgttgccgtgtcccgcaagcgtccgtcagaggggaactacgaaaaggagaaagaacac
tgcatcgccctgttcgaccagtggtcggaggccgaccaggttgagtttgtcgagcgcctg
atctcccgtatgtgccactaccagcacggccacatcaactcctacctcaaacccatgctg
cagagggacttcatcactgcgctgccagcccaaggcttggatcacatagcggagaacatc
ctgtctttcctggatgcacgctcgctttgctcggcagagttggtgtgtaaggagtggcag
agggtcatctctgagggtatgctgtggaagaagctcatcgaacgcatggtccgcaccgac
ccgctctggaaaggcctgtctgagagacaccagtgggagaaatatctgttcaagaaccgc
acgccagaagtcccacccaactcctactatcactccctttatcccaagatcatccaagac
atagagactatcgaggcaaattggcgatgtggcagacacaacttgcagaggattcagtgt
cgctcagaaaatagtaaaggggtttactgcctccagtacgacgatgacaagatcatcagt
ggccttagagacaattccatcaagatctgggataagcagtctctggagtgtctgaagata
ctgaccggtcacacaggatcagtgttgtgtctgcagtacgacgagagggtcatcgtcacc
gggtcttctgactcaactgtcagggtgtgggaggtcacgacgggtgaggtactgaacaca
ctgatccaccacaacgaggcagttcttcacctgcgcttcgccaacggcctgatggtcacc
tgctcgaaagaccgttcaattgccgtctgggacatggcctctcctactgacatcagcctt
cgtcgtgtccttgtgggacaccgagctgccgtcaacgtggtcgattttgacgacaaatac
attgtgtccgcctcaggggaccgcaccatcaaggtatggagcaccagcacctgtgagttt
gtgcgcactctaaatggtcataagaggggcatcgcctgtctacagtacagagatcgcctg
gtggtcagcggctcatctgacaacacaatccggttatgggacatagagtgtggtgcatgt
ttgcgagtgctggaaggtcacgaggagctggtgcgttgcatccgcttcgataacaaaagg
attgtcagtggcgcctacgatggcaagatcaaggtgtgggacctgcaggcagcgctggac
ccacgagcccccgccagcacattatgtctgcgcactctagtggagcactctggccgcgtg
ttccgcctccagttcgatgagtttcagatcatcagcagttctcacgacgacaccattctg
atctgggacttcctgaacgtctcgaccaacggccagtcagagggacggtctccctcccgc
acctacacttacatttctagatag

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