Trematomus bernacchii (emerald rockcod): 117485512
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Entry
117485512 CDS
T09643
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117485512 (rnf20)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117485512 (rnf20)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117485512 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
SOGA
Impact_N
Motif
Other DBs
NCBI-GeneID:
117485512
NCBI-ProteinID:
XP_033989966
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MSGQKRPSDPCGPSSSGAPPEKRREREGEDGAPGVSTGGSTAVETVIKLGGVSNSEEQDI
RALQTKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENVQLTI
RRYDQASSEPEKSQTGEGRSLKPDTPEPDGDSNQERAKDRGNQGEPNNSFLATLASSSSE
EMEAELQERVEKSQKQASHVVEIYECLKRTVDQLKTELDSGADGSLWQAASKLNTLLTNE
NKRLQQLTEDFKQKHSHMTSQTRPLGRAANKADQRVSELQVLIEELQWDMEKIRRRENRL
NAHLTEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSDMEENTELADNRFVELQKL
QQDLQSVHQENNNMKAELLIRAEGVVKETSEYRCLQSQFSVLYNESLILKSQLDETRARL
NTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANEQA
GPINREMRHLISTLQTHNQQMKGEVVKYKIRLRETQAELNQVRASKGNAILQSQSSTEMD
VKDETTSPSTPAVSGEPVVKSEADNGSSTPSSTGASVKTEPGAEPEATVKEEEKDEKKEK
EEKREKDIIKKEEKDREREKEKEKERERPTRSSGSSSVMKEERTSSSQPEESAGERLSIG
GSKRKEMEQLKIIRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKSKSEGEE
LRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVTG
QAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVD
AQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQESAVLSEEVRTQLEQVQL
RLKLVREEVIENSISREKESFNARRAQEDISKLRGKIEKAKKPAEKISNGDDILNEEISD
YKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaagcgtccttcggacccctgcggcccctcgtcctccggggcgccgccg
gagaagcggagggagagggagggagaggacggagcccccggtgtcagtaccggggggagc
accgcggtggagacggtcatcaaactgggaggggtgtccaactcagaagaacaagacatc
agggctctccagacaaagaaccgaaagttgggagaatctcttgatcaaagacaggtcatt
gaggatgaattgcgagagcgaattgagagactggagacccgtcaggccactgatgatgcc
agtctgctgatcctcaacagatactggaaccagtttgatgaaaacgttcaactgaccatc
agacgttatgaccaagcgagcagcgagcctgagaaatctcagactggtgagggacggagc
ctgaagccggatactccagaacctgatggcgactccaaccaggagcgggccaaggacaga
ggcaaccagggagagccaaacaactctttcctggccacgttggcgagcagcagcagtgag
gagatggaggctgagctccaggagagggtggagaaaagccagaagcaggccagccacgtg
gtggagatttatgagtgtctgaagaggaccgtggaccaactgaagacagagctggactct
ggagctgacggcagtctgtggcaggcagcttccaaactgaataccctcctgaccaatgaa
aacaagcggctgcaacagctgacagaggactttaagcagaagcacagtcacatgaccagt
cagactcgtcctctgggtcgtgcggctaacaaagcggaccagcgtgtcagcgagctgcag
gtcctgatcgaggagctgcagtgggacatggagaagatccgccgccgcgagaacagactg
aacgctcacctgactgagatactggagagggtgaacagcaaaggctataaggtgtgtggg
gaggccagcagcgtttgtgggaccatcactattaacaagagaaagtttgaagaaatgaac
agtgatatggaggagaacacggagctggcagacaaccgcttcgtcgagctgcagaagctc
cagcaggacctgcagagtgtgcaccaggagaacaacaacatgaaggcggagctgctgatc
cgagcagagggcgtggtcaaagagacttctgagtatcgctgcttacagtcacagttttct
gtgctctacaacgagtctctgatcctgaagtctcagttagatgagacacgtgctcgtctc
aacaccaccaggacggcgaggctccgacagctggagcacatggagaatgacgaggtggct
ctgcagaggaaggttcgtacggaggtgtttcagctggaggacacactggctcaagtcagg
aaggagtacgagatgttgcgcattgaatttgaacagacgcttgctgccaacgagcaagca
ggtcccatcaacagggagatgcgtcacctgatcagcacgttgcaaacacacaaccagcag
atgaagggagaggtggtgaaatacaagatcagactgagagagactcaagctgagctcaac
caggtccgcgcctcaaagggaaatgccatcctccagtcccagtccagcacagagatggac
gtgaaggatgagaccacctctccttcgacaccagccgtctccggggagcctgtggtcaaa
tcagaggctgacaacggctcctccacacccagcagcactggagcctctgtgaaaactgag
cctggagcagaacctgaagcaaccgtaaaagaggaggagaaagatgagaagaaagaaaag
gaggaaaagagagaaaaggacattataaagaaagaggagaaagacagagagcgtgagaaa
gagaaggaaaaggagagagagaggccgactcgcagcagtgggagcagcagtgtgatgaag
gaggagaggaccagcagcagccagccggaggagtcggccggggagcgcctctccatcggg
gggtccaagaggaaagagatggagcagctgaagatcataagagccgaactcaagaaagcc
caggagtcccagcgggagatgaagctgctgctggacatgtaccgctcagcgccaaaggag
cagagggacaaggtccagctcatggctgcagagaagaagtccaagtcagagggagaggag
ctgcggcagaggctgagggagcttgaggagcgggagaggagggagggcaaaaagatggcg
gacgaagaagctctgaggaagatccgctctgtggaggagcagatcgacatcctcaacaag
aagctctccatagcaaaacaggaggaggacgccctgctgagcgagatggacgtgacggga
caggccttcgaggacatgcaggaacagaacatccgtctgatgcagcagctcagggaaaaa
gacgatgccaacttcaagctgatgagcgagcggatcaagtccaaccagatccacaagctg
ctgaaagaggagaaggaggagctggcagaccaactgctgactttaaaaactcaggtggat
gcccagctgcaggtggtgaggaagcttgaggaaaaggagcgcctcctgcagggcaccatc
agcactgctgagagagagctggcacttcgaacacaagcgttagacatgaacaaacgcaag
gctcaggagtctgcggtgctgtcggaggaggtgcgaacccagctggagcaagttcagctg
aggctcaaactggtcagagaggaggtcatagagaacagcatctccagggagaaagagtcc
tttaatgccagacgagcacaggaggacatctccaaactaaggggaaagatcgagaaggcc
aagaaaccagcagagaaaatcagcaacggagacgacatccttaatgaagaaatcagtgac
tataaggcgcgcctaacgtgtccttgctgcaactcccgggtgaaggatgcagtcctgaca
aagtgcttccacgtcttctgcttcgagtgcgtaaagacgcgctacgacacacgccagagg
aagtgccccaagtgcaacgccgccttcggagcgaacgacttccaccgcatatacatcggc
taa
DBGET
integrated database retrieval system
