Trematomus bernacchii (emerald rockcod): 117485583
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Entry
117485583 CDS
T09643
Symbol
stxbp5l
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117485583 (stxbp5l)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117485583 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117485583 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_VPS8
Beta-prop_WDR19_1st
Synaptobrevin
GUB_WAK_bind
VPS8_N
Motif
Other DBs
NCBI-GeneID:
117485583
NCBI-ProteinID:
XP_033990065
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTMGSPSSGSAAGTPTAAPTPKEIDIQETLVSENFQMCKTVRH
GFPYQPTALAFDPVQKILAIGSRTGGVRILGRPGVDCYCQHESGSAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDCPKDEGKLLIGFESGMIVQWDLRGKKADFRI
CYDEAIHSAGWHHEGKQFMCSHSDGSLSMWNLRNTIKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRSSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMALCETPY
NNEVQEPYAVVVLLEKDLIVVDLTQSNYPVCENPYPMDIHESPVTCTAYFADCPPDLIPI
LYSIGAKHKKTGYSQKEWPIAGGLWTVGCNTYPEIILTGHADGSIKFWDASAITLQMLYK
LKTSKAFEKPKPVEGRAADLMEEDPFAVQMVSWCPQSRIFCVVGISAHIILYRFSKYDAN
TQITSLEVRLQCESEDVISPSDNENNPCFSESGSHSPQTHHHHPASPGSKTPEGNKDTIP
CLKVKERMVRVPPGYQAELVIQLLWVDGEPPQQITSLDINSAYGLLAFGNCNGLAVVDYL
QKTILLCMSTLDLYGGTDPYQRLTRSPRRNRQSTSDFSMRGLSNFYSDSKKRIRTSYQSL
TELSDNQQSIDMERSKSPTSVHYPTSLHNDPRVLPEPVASLRASHCSPVFYLLDNVKGPG
RKLSLPTDLKTDLDHVNGHCTSPTSQPSAGKPRVPMGPEGPRLTRRGPGRPPFRKAQSAA
CMEISLPVSHTEVGYASRRAMLQQFHGVTMYSHDEHHSTPPYSWTDKESRENSFSRSRSS
SVSSIDRDTKEAITTLQFGESYGRKNDALPNPCLWVGTSLGVALVIPMSIPTDHEERMEV
PVTMGPSGTVLMLKGSVLRFGFLDCMGSLIQSPYEVWRDLNGPEDPDRVRKRKLVHFSPS
SSQDSCGEGHLAVVCSERQAKVILMPSQSVLFVHNITESSFVLRADVVSVSNSVCLACFC
ANGHIMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMC
DNLQEMLGELFTPIETPEAQNRGFLKGFFGGNSHNFDREELFGEASAGKASRSLAQHIPG
QAGMEGMKVAASGVVGDLARARIALDERGQRLGELEDRTALMMTSADVFSKHAHELMLKC
KDKKWYQF
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggtgttggacggcttgaccacctcctctccgggaggcactatg
ggatccccatcgtccggcagcgcggccgggacccccaccgcggcgccaactcctaaggaa
atcgacatccaggagacccttgtgtcagaaaactttcagatgtgtaagacggtgcgtcac
ggtttcccttaccagccaactgctttggcctttgaccccgtgcagaagatcctggccatc
ggctccaggacaggcggcgtgcggatactgggacgacccggagtggactgctactgtcag
catgagagtggatcagctgttcttcaactgcagttcctcatcaatgagggggcgctggtc
acagcctgtgcagatgacacgcttcacttgtggaatctccgtcagaggcgaccggctgtc
ctccattcactcaaattcaacagagagaggatcacgttttgccaccttccctttcagagt
aaatggctgtacgtggggacagagcgcggaaacacacacatcgtcaacatcgagtccttc
attctgtctggatacgtcatcatgtggaacaaggcaatagaactatcaactaaaactcat
ccaggccctgtggttcatttgagtgactgcccaaaggacgaaggcaagttgcttataggg
tttgagagcgggatgatcgtacagtgggacctgcggggcaagaaggccgacttcagaatc
tgctacgatgaggccatccattcagccggctggcatcacgaaggcaagcagttcatgtgc
agtcactcagacggcagcctgtccatgtggaacctcagaaacaccatcaagccattccag
gtcaccttccctcatggaaagatacagaaggatggaagaaaggagtcctgtaaacccatc
ctcaaagtggagtacaagacctcgaggagcagcgagccttttgtcatcttctcggggggg
ctttcgtatgacaaggcagggcggcggccaacgctaaccatcatgcacggcaaggccatc
accgtgctggagatggactatcctatagtggagttcatggcactctgcgagactccttac
aacaatgaggtccaggagccttatgcagtggtggtgcttttggagaaggacttaatcgtg
gtggatctgacacagagcaactaccctgtctgtgagaatccttaccccatggacatccac
gagtctccagtcacctgcacggcctattttgcggactgtccgcccgaccttatccccatc
ctctactccataggagctaaacacaagaagaccggctacagccaaaaggagtggccgatt
gctggaggattgtggacagtaggctgcaacacctacccagagatcattctcacaggacat
gctgatggatcaattaagttttgggacgcatctgcaatcacactacagatgttgtacaag
ctgaagacctccaaagcctttgagaagccaaagccagtagaaggcagggctgctgacttg
atggaggaagaccccttcgctgtccagatggtcagctggtgcccccagagtcgcatcttc
tgtgtggtcggcatatcagctcacatcattctgtatcgcttcagcaaatatgatgccaac
actcagattacgtcattggaggtgcgcctacagtgtgagtcggaggatgtcatctctccg
tccgacaatgaaaacaacccctgcttctctgagtccggctcccactccccgcagacccac
caccatcacccagccagccctggcagcaagacccccgaggggaacaaagacaccatcccc
tgccttaaggtgaaggagcggatggtcagggtccctcctggctaccaggcagagctggtc
atccagctgctgtgggtcgatggagaacctccacaacagatcaccagcctggacatcaac
tctgcctatggccttttggcgtttgggaactgtaatggcctagcagtggtggactacttg
cagaaaaccatcctgttgtgtatgtccacactggatctgtatggaggcacggacccttac
cagcgccttacccgctccccccgcaggaacagacagtccacctcagactttagcatgcgt
ggcctgtctaacttttattcagattcaaagaaaaggatccgtacatcctatcagagcctt
acggaactctctgacaaccagcagtccattgacatggagagaagcaagtcgcccacctca
gttcattacccaacctcccttcacaatgacccacgcgtcctgcccgagcctgtggccagt
ctgagagccagccactgcagtccagtcttttacttgctggacaatgtaaagggacccggc
agaaagttaagtctgccgacagatcttaagactgatcttgatcatgtcaatggacattgc
actagccccacctcccagccctcggcaggcaagcctcgtgtcccgatgggtcccgagggg
ccacggcttacccgcagaggccctggccgaccgcccttccgcaaggcccagtctgctgct
tgcatggagatctctttgcctgtgtcccacactgaagtaggttatgcgtccaggagggca
atgcttcagcagtttcacggagtcactatgtactcccatgacgagcatcacagcaccccc
ccctacagctggactgacaaagagagtcgtgaaaactccttcagccgctcacgcagttcc
agcgtgtcgagcatcgaccgggacaccaaagaggcgatcaccacgctgcagtttggagag
tcctacgggcgcaagaatgacgccctgcccaacccgtgtctgtgggtgggcaccagctta
ggcgtggccctggtcatcccaatgtccattcccacagaccacgaggagaggatggaggta
ccagtgaccatgggccccagcggcacggtgctgatgctgaagggctcagttttacgattt
ggcttcttggactgcatgggatcgctcattcagagcccctacgaggtttggcgggacctc
aacgggcccgaggaccctgaccgcgtgcggaagcgcaagctggtccacttctcgccgtcg
tcctcccaggactcctgcggagagggacatctggctgtggtgtgctccgagaggcaggcc
aaagtcatcctgatgccctcgcagtccgtcctcttcgtccacaacatcaccgagtcgtcc
ttcgtgctgcgcgccgacgtggtctctgtgagcaacagtgtgtgcctggcctgcttctgt
gccaacgggcacatcatgactctcagtttgcccagcctaagaccgctgatggatgtcaat
tacctgcctctgactgatatgcgcatcgcaagaaccttttgcttcaccaacggggggcag
gctctatacctcagctcccccacagagatccagagaattacatacagccaggagatgtgt
gacaacctgcaggagatgctgggggagctgtttacaccgatagaaacaccagaggcccag
aacagaggcttcctaaagggcttcttcggaggaaactctcataacttcgacagagaagag
ctctttggcgaggcatcagctgggaaggcttctcgcagcctggcccagcacatccccggg
caggcgggcatggagggcatgaaggtggcagcgagcggggtggtgggggacctggcccgg
gcgcgcatcgctctggacgagagaggccagcggctgggggagctggaggaccgcaccgcc
ctcatgatgaccagcgcagacgtcttctccaaacacgctcatgagctgatgctaaagtgc
aaggacaagaagtggtaccaattctaa
DBGET
integrated database retrieval system
