Trematomus bernacchii (emerald rockcod): 117485609
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Entry
117485609 CDS
T09643
Symbol
myo1b
Name
(RefSeq) unconventional myosin-Ib isoform X1
KO
K10356
myosin I
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117485609 (myo1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117485609 (myo1b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117485609 (myo1b)
03036 Chromosome and associated proteins [BR:
tben03036
]
117485609 (myo1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117485609 (myo1b)
04147 Exosome [BR:
tben04147
]
117485609 (myo1b)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117485609 (myo1b)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Phagocytosis
Others
117485609 (myo1b)
Others
Actin-binding proteins
Myosins
117485609 (myo1b)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117485609 (myo1b)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117485609 (myo1b)
Exosome [BR:
tben04147
]
Exosomal proteins
Proteins found in most exosomes
117485609 (myo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_16
AAA_22
TPR_Nup160_C
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117485609
NCBI-ProteinID:
XP_033990098
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLSEDSFIANLRNRFDHNEIYTYIGSVVISMNPYRSLPI
FTPEKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKLVMS
YVAAVCGKGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGG
VISNYLLEKSRVVKQPRGERNFHIFYQLLSGASDDTLKKLKLDRDFSKYNYLSLDSAAVN
GLDDAANFRTVRNAMQIVGFMEDEVQSVLELVAAVLKLGNIEFKPESRCNGNDESRIRDK
NDLKEMCELLGTEQTVLERAFSYRTVEAKQEKVCTTLNVAQAYYARDALAKNLYSRLFSW
LVTRINESIKAAPKSRHKVMGVLDIYGFEIFEENSFEQFIINYCNEKLQQIFIELTLREE
QEEYVREGIEWTNIEYFNNAIICDLIENHQNGILAMLDEECLRPGTVTDETFLDKLNTIC
AEHLHFESRLSKSSKFLTDHSLPHNCFRIQHYAGKVLYRAEGFVDKNNDLLYRDLSQAMY
KANHSLMKQLFPEGNPAKVNLKRPPTAGFQFRHSVGTLMRNLQTKNPNYIRCIKPNDKKA
SHIFTDSLVCHQVRYLGLMENVRVRRAGYAFRQAYEPCLERYKMLCKRTWPHWRGPAREG
VEVLMADLTVPAEEFSFGRSKVFIRNPRTLFFLEERRRQCLQDLATLIQKIYRGWKCRSH
FLLLKKSQIVVAAWYRRYAQQNKYKRIKSATTVVQSYTRGWQARKLLRELKYQKRCEEAV
TTISAYWHGTQARMELRRLKQEARNIHAVTVIWAYWQGTKARRELRQLKEEARNKHAVSV
IWAGWQGTKARRELRRLKEEARRKHAVAVIWAYWKGLKVRREYRKFFRANAGKKIYNFTI
QRIMQKYFLGLKSTMPSMSPIDKSWPVKPYLFLDGVHSELRRIFHLWRCKKYRSEFTEEK
KAVFEEKLEASEIFKDKKALYASSVSQPFMGDYLEISKNPKYQKLNSAMDEKVLLADVVN
KINRANGKGTARIFLLTKNSVVLADQKTGQVKASVPLPDLTSVSVSTQSDGFFALKLKEG
SASAIKGDFLLSSEHLIEIITKLHRTGATAADSEQLNIDISDEFLVQFKHDKVCVKFIQG
APKNGNSVSCKRKNNRLLEVSVPSTV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacgtcacttctagacaacatgattggggttggagacatggtcctccta
gaacccctgtctgaagactcgttcatcgcgaacctgaggaaccgctttgaccacaatgag
atctacacctacattggcagtgtggtgatctccatgaacccctacaggtccctgcccatc
ttcacaccagaaaaagtggaggagtatcgcaacaggaacttctacgaactcagtccacac
atctatgctttggcagatgaggcctatcgctcactgagggaccaggacaaggaccagtgc
atcctcattacaggggagagtggggctgggaaaactgaggccagtaagctggtgatgtca
tacgtggcagcggtgtgtgggaagggccaggaggtgaacaaggtcaaggaacagctgctg
cagtccaatcccgtgctggaggccttcggaaatgccaaaacagtgaggaacgacaactct
tccagatttggaaagtacatggacattgagtttgacttcaaaggagatcctctgggtgga
gtcattagcaactatctgctggagaagtcacgtgtggtgaaacagccgaggggagagagg
aacttccacatcttttatcagctcttgtccggcgcctccgatgacacactcaagaagctg
aagctggatcgggatttcagcaagtacaactacctgagtctggactctgccgccgtcaac
gggctggatgatgcggccaacttcaggacagtcagaaatgccatgcagatcgtgggcttc
atggaggacgaggtgcagtcggtgctggagctggtggccgccgtgctgaagctcgggaac
atcgagttcaagccggagtcgcgctgcaatggcaacgacgagagccgcatcagagacaaa
aacgatttgaaggagatgtgtgagctgctggggaccgaacagacggtgctggagcgagcg
ttcagctaccgcacagtggaggctaagcaggagaaagtctgcaccacactgaacgtggcg
caggcctactatgccagagacgcccttgccaaaaatctctacagtcgcctgtttagctgg
ctagttaccaggatcaacgaaagcattaaagcagcaccgaaatcccgccacaaggtcatg
ggtgtgctcgacatctatggctttgagatattcgaggaaaacagctttgaacagttcatc
atcaactactgtaacgaaaagctgcagcagatcttcatcgagttgaccctccgcgaggag
caggaggagtacgtcagagagggcatcgagtggaccaatattgaatatttcaacaacgcc
attatctgcgacctgatagagaatcaccaaaatggcatcttggccatgttggacgaggag
tgcctgaggccggggacggtcaccgatgagaccttcctggacaaactgaacaccatctgc
gctgaacacctgcactttgagagtcgcctcagcaagagttcaaagttcctcactgaccac
agcctgcctcacaactgcttccgcatccagcactacgccggcaaggtgctttaccgcgcc
gagggcttcgtagacaagaacaacgacctgttataccgggacctgtcgcaggccatgtac
aaggccaaccacagcctcatgaaacagctgttccctgagggcaaccccgccaaagtcaac
ctgaagagaccgcccactgctggattccagttcagacattcagtcgggacgctcatgagg
aacctgcagaccaagaaccctaactacatccggtgcatcaagcccaacgacaagaaggcc
tcccacatcttcaccgactccctggtctgccaccaggtgcgctacctgggcctgatggag
aacgtgcgtgtgcggagagccggctacgccttccgccaggcctacgagccgtgcctggag
cgctacaaaatgctctgcaagcggacctggccccattggagagggcctgccagggaagga
gtggaggtactgatggctgacctcacggtcccagctgaggagttctccttcggtcgctcc
aaggtcttcatcaggaacccaagaacgctcttcttcctggaggagaggaggaggcaatgc
ctacaggacctggccacgctcattcagaagatctaccgcggctggaagtgtcgcagccac
ttcctgctgctgaagaagagtcagatcgtggtggcggcatggtaccgccgatacgcgcaa
caaaataaatacaaacggatcaagagcgccaccactgtggtgcagtcctacactcgggga
tggcaggcacgcaaactcctgagagagctgaaatatcagaagagatgtgaggaggcggtg
accaccatctctgcctactggcacggcacacaggctcggatggagctgaggcgtctaaaa
caggaagcgcggaatatacacgctgtgacagtaatatgggcatactggcagggaaccaag
gcccggagagagctgcgtcagctgaaggaggaggcgaggaataaacacgccgtgtcggtc
atttgggccggctggcaaggcaccaaggctcgcagggagctgagaagactgaaggaggag
gccaggcgtaagcacgctgtcgctgtcatttgggcctactggaagggactcaaggttcgc
agagagtacagaaaattcttcagggcaaacgcaggcaagaagatctataacttcaccatc
cagaggattatgcagaaatatttcctgggcctgaagagcaccatgccctccatgtccccc
atagacaagagctggcctgttaagccttacctcttcctggatggagttcactcagagctg
cggagaatcttccatctctggaggtgcaagaaatacaggagcgagttcacagaggagaag
aaggcggtgttcgaggagaagctggaggccagtgagatcttcaaagataaaaaggctctc
tacgccagcagtgtgagccagcccttcatgggagactacctggagatcagcaagaacccc
aaatatcagaaactgaacagcgccatggacgagaaggtcctgctggctgacgtggtcaac
aagatcaacagggccaacggcaagggcacggctcggatcttcctgctgactaagaacagc
gtggtgctggccgaccagaagacgggtcaggtgaaggccagtgtccctctgccggacctc
accagcgtgtcggtcagcacgcagagcgacggcttcttcgctctcaaactcaaagaggga
tcagcctcagccatcaaaggagacttcctactcagcagcgaacatctgatcgaaatcatc
accaaacttcaccgcaccggggccacggctgcagacagcgagcagctcaacatcgacatc
tcagacgagtttctggtgcagttcaaacacgacaaagtctgcgtgaaattcatccaggga
gctcccaagaacggcaacagcgtgtcctgcaagcgcaagaacaaccgcctgctggaggtg
tcggtgccttcaacggtatag
DBGET
integrated database retrieval system
