Trematomus bernacchii (emerald rockcod): 117485631
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Entry
117485631 CDS
T09643
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a
KO
K23619
collagen type XXVIII alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117485631 (col28a2a)
Peptidases and inhibitors [BR:
tben01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117485631 (col28a2a)
BRITE hierarchy
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117485631
NCBI-ProteinID:
XP_033990127
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MTLRCGQFLVGSRMFPSFKLVLLVTALTCVWAQDLYEERKTNKKSRAKPVAANIHNGQAI
LDEDCSLELSFLLDSSESAKDNHEQEKQFSMNMVDRLKGIQLPTGQGLSLRVALLQYSSH
VIREQTFKDWRGTENFKTLITPIVYIGHGTYTTYAITNMTRMYLEETSPSSIKAAVLLTD
GISHPRNPDIFSAVADAKNQGIKIFTLGITRAANEPANVAQLRLLASSPASHFLYNLQDE
DVIQKIVTEITSLAEESCPLAQKCACEKGERGPSGPAGKKGRSGEDGAPGLRGQKGEAGL
SGLPGKEGAEGKPGYKGEQGERGECGTPGIKGDRGPEGPVGTRGPRGLQGLPGPHGDVGP
EGHQGKQGERGTSGPPGIQGETGIGLAGPKGDMGFQGRAGPPGPHGVGEHGPPGPQGQQG
VQGERGPQGEGLPGPKGERGLGGPRGPRGQQGAGIKGERGDMGPLGFPGPTGLTGAGIQG
EKGVEGPKGPPGGRGNRGEGLPGPKGDQGLPGEQGSTGERGLGEPGSKGDPGSAGLGGLP
GLPGEDGAPGQKGEGSLPGLRGAEGAQGIGIQGEKGDQGLRGIRGLHGPPGISGPSGPKG
ERGLSGRQGMPGQPGRSISGPKGDVGTAGPSGPVGETGHGLPGPKGDRGHLGPLGPVGPK
GEGFPGPVGPPGLPGLQGEQGPEGVGIPGPKGDVGFRGLPGLPGPTGEGLQGLPGNVGRA
GPAGPSGPAGEGIQGPKGDAGSQGMTGPRGPHGDGLPGSKGDRGSQGERGTKGTKGELGD
EGVPGELGKPGVKGDQGLTREDILKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFE
IIKDFVTRLVDRTTVGRNATRIGLVLYSLDVHLEFNLVRYMSKQEVKQAIRKISYMGEGT
YTGTAIRKATQEAFFSARPGVRKVAIVITDGQTDNREPVKLDIAVREAHATNIEMYALGI
VNSSDPTQAEFLQELNLIASDPDSEHMYLIDDFNTLPALESKLVSQFCEDENGALIYNRL
TNGNWNNGHGHGTNGNNGHGTNGHVVNNNGYNGNNGYVVYNNGYGDTGKAKDNQEENPSS
GRTSSRGRGDTFALPISADPLPIQELEDDEGEDLDYRAQTRGANTVATVAVVNKTTSLSP
VRESSDFNEAVISSSSSLSSSATSESTLISTLDLSSDQLQPVVSPVLPEEAPAQDPRCNL
TLEQGTCRDYTIYWYYDMQANACAQFWYGGCGGNDNRYETEDECKKTCVLNKTG
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgactttgcgctgtggacagttcctagttgggtcaaggatgtttccctcctttaagttg
gtgctgctggtcacagcactgacatgtgtttgggcgcaagacctttatgaagagaggaaa
actaacaagaaatccagggccaaacctgtggctgcaaatatacacaatggacaagccatc
ctggatgaggactgtagcttggagctctccttcctgttggacagctccgagagcgccaaa
gacaaccacgagcaggagaagcagttctccatgaacatggtggacagactgaagggcatc
cagctgcctaccggccaaggattgagcttgagggtggctcttctgcagtacagtagccac
gttatcagagagcagaccttcaaggactggaggggcacagagaacttcaagacccttata
actcccatcgtctacatcgggcacggcacctacaccacctacgccatcaccaacatgacc
aggatgtacctagaagaaaccagccccagcagcatcaaagcagccgtgctgctcacagat
ggcatttcccatccgaggaacccggacatcttctctgctgttgctgatgccaagaaccag
ggcatcaaaatcttcactctgggcatcacccgggcagccaacgagccagccaatgtcgcc
cagctgcgactactggccagctccccggcttcccacttcctctataatttacaggacgaa
gatgttattcaaaaaatcgtcactgagattactagcttggctgaagaatcatgccccctg
gctcagaaatgtgcttgtgaaaaaggagagaggggacccagcgggcctgcggggaaaaaa
ggtcgctccggagaagacggagcccccgggcttagagggcaaaagggtgaagcaggacta
agtggtctacctggaaaagagggtgctgaggggaaaccaggttacaaaggagagcagggc
gagaggggtgaatgtggcactccaggaatcaaaggagacaggggccctgagggaccagtt
ggaacaagaggacctagagggctgcaggggttaccaggaccacatggggacgttggacca
gagggccatcagggaaagcagggtgaacgtggcacatctggccctccaggaattcagggg
gaaactggcattggccttgctggaccaaagggtgatatgggattccagggtcgagcaggt
cctcccggcccccatggagtgggcgaacacggccctcctggacctcaaggacaacaaggt
gttcaaggggaaagaggaccccaaggcgaggggcttcccggaccaaagggggaacggggg
ctcggcggaccgaggggaccaaggggacagcagggtgcaggaatcaaaggagaacggggt
gatatggggcctctaggttttccagggccaactggactgacaggagcgggcatacaggga
gagaagggagtcgagggtccaaagggtccaccaggtggcagaggaaatcggggagaaggt
ttacctggacctaagggagatcaaggtttaccaggagagcaggggtccacaggagagaga
ggccttggggagccaggttcaaagggggatcctggatcagcgggtttggggggcctgcct
ggtcttccaggagaggacggagctccagggcagaagggggagggtagtttacctggtcta
agaggtgctgagggagcacaaggaattggcattcaaggagagaagggtgaccagggtctg
aggggcatccgagggttacatggaccacctgggatatcaggaccatctggaccaaagggt
gaacgtggtttgtcaggccggcagggcatgccgggacagccaggacggtccatatcaggt
ccaaagggtgatgtaggaactgctggtccctctggtcctgttggagaaacaggccatgga
ttacctggtccaaagggtgatcgtggtcatctgggtccattagggccagttggaccaaaa
ggcgaaggcttccccggacctgtgggtcctccaggcctgccaggattacagggcgagcaa
ggcccagaaggagtaggaatccctggtcccaagggtgatgttggctttcgaggattgcca
ggtttgcccgggccaactggagagggcttacaggggctgcctggtaatgttgggagggca
ggacctgctggtccatctggtcctgcaggagaaggtattcaaggcccaaagggtgatgca
ggatctcagggtatgactgggccaagaggtcctcatggagatggattgcctggatccaag
ggtgatcgtggatcacagggtgagaggggcacgaagggtacaaaaggagaattgggagat
gaaggagtccctggtgaactaggaaagcctggagttaaaggagaccaaggactcacaaga
gaagacattttgaagctgatcaaagaaatctgcggatgtggcatcaagtgcaaggaaagg
ccgatggagttggtgttcgtcatcgacagctcggagagtgtcggccccgagaactttgaa
atcattaaggactttgtcaccaggttggtcgaccggaccacagtcggacgcaatgccacc
aggatcggactggtcctttacagtctggatgttcatttggagttcaacttggttcgctac
atgagcaaacaggaagttaaacaggccatcagaaagatctcttacatgggtgagggcacc
tacactggcaccgccatcagaaaggcgactcaggaggcgttcttcagcgctcggcctgga
gtcaggaaagtagccatcgtcatcaccgatggtcaaactgacaaccgagagccagtcaaa
cttgacatagctgtgagggaagctcacgccacaaacatcgagatgtacgccctggggatc
gtcaactcttctgatcccacgcaggctgagttcctgcaagaactcaacctcattgcctct
gaccccgacagcgaacacatgtaccttattgatgacttcaacactctaccagcactggag
tctaaactcgtcagccagttctgtgaagatgaaaatggcgccctcatttacaatcgttta
acaaatggaaactggaacaatggccatgggcatggtactaatggaaacaatggccatggt
actaatggacatgtagtgaacaacaatggatataatggcaataatggttacgttgtatat
aataatggatatggagacactggaaaagctaaagataaccaagaggagaatccaagttcg
gggcgcaccagcagccgaggccgtggagacaccttcgcgctgcccatcagcgctgatccc
ctcccaatccaggagctggaagatgatgaaggtgaagatttagactacagagcccagacg
cggggcgctaacacggtagcaaccgtagctgtagttaacaaaacaacatctttatcgcct
gtaagagaaagctccgacttcaatgaggccgtcatatcatcttcttcatccttatcttct
tctgcaacatctgagtcaacactgatctcaactttagatttaagctctgaccagttgcag
ccagtggtgagtccagtcctgcctgaagaggcccctgctcaggaccctcgctgtaaccta
accttagaacaaggcacctgcagagactacaccatatactggtactatgacatgcaggcc
aatgcctgcgcacagttctggtacggaggctgcggtggaaatgacaaccgttatgaaaca
gaagatgaatgcaagaagacttgcgttctaaacaaaacaggataa
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integrated database retrieval system
