Trematomus bernacchii (emerald rockcod): 117485641
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Entry
117485641 CDS
T09643
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117485641 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117485641 (xrcc5)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
117485641 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
117485641
NCBI-ProteinID:
XP_033990141
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MAGSKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFVQRQVFKEAKDELALVLFGTD
ATNNSLEQDDQYQHISVHRHLMVPDFELLEEIENQIHLENQQADWLDALVVCMDLLKKET
QGKKCDRLNVVLLTDLNTQASSEQLDVIIENLKQADITLQFFLPFPAEEDEEVGGDAGEG
GPGHPGTGKGLSREQQSGLDMVKHIMLSLDEEDGLNEIYSFRKAIEQLCMFKRIERKPMA
WPCQLTIGSCLSIRIVGYKAVTEEKLKKIWATVDAQTNQKEDVKRETVYCLDDDNETEVP
KEDTIQGFRYGSDIVPFDKIDQEHMKYKHDGKSFAVLGFAKQNMIRRHQFMGNQVIKIFP
GRDDEHAGVALSALIRALDELNMVAIIRYAYDRRCNPQVGAAFPCIKLDYECLMYVQLPF
MEDLRQYTFPSLENNKKFTPSDTQLSAVDSLIDSMMLVEKDENGDEKDMYKVHNIPNPSF
QRHFQCVHHRAVSPGTPLPPMEPWLKAALERPDVITERCQAPLEEVKRKFPLTEVEKKKK
VKTSAQIFGKDPEEPGAKKAKEEEDEEDYSLANIAEGPVTSVGSVDPARDFRTLLKKKSL
SFGEVCQQLTHRIEQLLGNKNTHYYMKSITCIEAFREQSVKLEDASLYNGYLQSLKRSIP
NRGLEVFWDLLVQDAITLISKDEVEGSTVSKSESNQFLVTEEKKEEAAAPPAEDTGDVDD
LLDMM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttccaaatcagcgttggtgttgtgcatggatgttgggttctccatgtccaac
tccgccccgggtgaagagcctccctttgaacttgccaaaaaagtcattcagaagtttgtc
cagcgccaggtttttaaagaggccaaggatgagctggctttagttctgtttggcacagac
gccaccaacaactcactggagcaggacgaccagtaccagcacatcagcgtgcatcgtcac
ctcatggtgcctgactttgagcttctggaggaaatagagaatcagatccatctagagaat
cagcaggctgattggctggatgctcttgttgtgtgcatggatctcctcaagaaagaaaca
caggggaaaaagtgtgatcgtctcaacgttgtcctcctgactgacctcaacacacaggcc
agctcagagcagctcgatgtcattattgaaaacctgaaacaagccgacatcaccctgcag
ttctttttgcccttccctgcggaggaagatgaagaggttggaggagatgctggcgaaggc
ggccccggtcacccaggcacaggaaaaggtctgtccagggaacagcagagtggcctggac
atggtgaaacacatcatgctgagcctggatgaggaggacggcttgaatgaaatttactcc
ttcaggaaagcaatcgagcagctgtgcatgttcaagcgcatcgagaggaaacccatggcc
tggccctgtcagctgaccatcggcagctgtctgtctatccgtattgttggatacaaagca
gtgacagaagagaaactgaagaagatatgggctacagtcgatgctcaaacaaaccagaag
gaggacgtgaagagagagactgtctactgcctggatgatgacaatgagacagaggtgcca
aaggaggataccatccaaggttttcgttatggaagtgatattgttcccttcgacaagatt
gatcaagagcatatgaaatacaagcacgacgggaaaagctttgctgttctcggattcgcc
aaacagaacatgatacgtcgccatcagttcatggggaatcaagtcatcaagatttttcct
ggcagagatgatgagcatgcaggagttgcactatccgctctcatccgagcactagatgaa
ctcaacatggtggccattatacgttacgcgtatgaccgacgctgcaaccctcaagtagga
gcagccttcccgtgcatcaagctggactatgagtgcctgatgtacgtccagctgcccttc
atggaagacctgagacagtatacattcccttcccttgaaaacaacaaaaagttcactccg
tcagacacccagttgtctgctgtggactctcttattgactccatgatgctggttgagaag
gatgaaaacggggatgaaaaggatatgtacaaggtccataacattcccaacccttccttc
cagaggcacttccagtgtgtgcatcatcgggcagtaagtcccggcaccccgcttcccccc
atggagccgtggctgaaggctgctcttgagcgccctgatgtcattactgaacgctgccag
gctccactcgaggaggtgaagaggaagtttcctctcacagaagtggagaagaagaagaag
gtcaagactagtgcacagatatttggcaaagaccctgaggagccaggtgccaagaaggcc
aaagaggaggaagacgaggaggattatagcctggctaacatcgctgaaggccctgttact
tcggtgggaagcgtggatccagccagagacttccggactctgctcaagaagaagagtctt
tcatttggagaggtctgtcagcaactgactcacaggatagagcagttgcttggcaacaag
aacacacactactacatgaaaagcatcacctgcatcgaggcttttagagagcagtctgtt
aagctggaggatgccagtctgtacaatggctacctgcagtccctcaaaagaagcatccca
aaccgagggctggaggtcttctgggacctgcttgttcaagatgccataacactgatcagc
aaggacgaggttgaaggaagcactgtgtccaaaagtgaatctaatcagtttctggttact
gaggagaagaaggaagaggcagctgcacctcctgctgaagatactggagatgttgatgac
ttgctggacatgatgtaa
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