KEGG   Trematomus bernacchii (emerald rockcod): 117485655
Entry
117485655         CDS       T09643                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04210  Apoptosis
tben04517  IgSF CAM signaling
tben04530  Tight junction
tben04540  Gap junction
tben04814  Motor proteins
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117485655
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117485655
  09143 Cell growth and death
   04210 Apoptosis
    117485655
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117485655
   04540 Gap junction
    117485655
  09142 Cell motility
   04814 Motor proteins
    117485655
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117485655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117485655
   03036 Chromosome and associated proteins [BR:tben03036]
    117485655
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117485655
   04147 Exosome [BR:tben04147]
    117485655
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117485655
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117485655
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117485655
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117485655
  Exosomal proteins of other body fluids (saliva and urine)
   117485655
  Exosomal proteins of colorectal cancer cells
   117485655
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117485655
NCBI-ProteinID: XP_033990163
LinkDB
Position
Unknown
AA seq 449 aa
MRECISIHVGQAGVQMGNTCWELYCLEHGIQPDGKMPEVKAIGGHDDSFTTFFSDTGSGK
YVPRAIFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNTAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctctatccacgtaggacaggccggtgtccagatgggcaacacctgc
tgggagctctactgtttggaacatggaatccagccggacggcaagatgcctgaagtgaag
gccatcggaggccatgatgactccttcaccaccttcttcagcgacactgggtctgggaag
tacgtccccagagccatctttgtggacctggaaccaactgtcattgatgaggtgcgtaca
ggaatgtaccgtcagctatttcacccggaacagctgatctccggaaaggaagatgcagcc
aacaactacgcccgtggacactacaccatcggcaaggagatcattgactctgtcctggac
agaatccgcaaactggctgatcagtgcacgggtctccaaggcttcctggtcttccactcc
tttggtggaggcacaggctctggtttcacctccctgctcatggagagactctccgttgac
tttggaaagaagtccaagcttgagtttgccatctacccggccccccaggtttccacagct
gtggttgagccttacaactccatcctgaccacccacaccaccctggagcactccgactgt
gccttcatggtagacaacgaggccatctacgacatctgccgcagaaacctagatattgaa
cgcccgtcttacaccaacctgaacaggctcatcagccagattgtgtcttcaatcacagcc
tcgcttcgcttcgatggagccctgaatgtcgacctcacggagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctatgctccagtcatctctgcagagaaa
gcctaccatgagcagctgtccgtagctgagattacaaactcttgctttgagccagccaat
cagatggtgaagtgtgatcctcgtcatggtaaatacatggcctgctgtctgctgtatcgc
ggtgatgtggtgcccaaagatgtcaacacagccattgctgccatcaagaccaaacgctcc
attcagtttgtggactggtgccccacaggcttcaaggtgggcatcaactatcagcctcca
acagtggtccccggtggagacctggccaaggtgcagagggctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggcccgtctcgaccacaagtttgacctcatgtacgcc
aaaagagcctttgtccactggtatgttggggagggcatggaggagggagagttctccgag
gccagagaagatatggctgccctggagaaggattatgaagaggttgggatcgattccttt
gaggaggatgaggaaggagaggaatattaa

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