Trematomus bernacchii (emerald rockcod): 117485655
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Entry
117485655 CDS
T09643
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04517
IgSF CAM signaling
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117485655
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117485655
09143 Cell growth and death
04210 Apoptosis
117485655
09144 Cellular community - eukaryotes
04530 Tight junction
117485655
04540 Gap junction
117485655
09142 Cell motility
04814 Motor proteins
117485655
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117485655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117485655
03036 Chromosome and associated proteins [BR:
tben03036
]
117485655
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117485655
04147 Exosome [BR:
tben04147
]
117485655
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117485655
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117485655
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117485655
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117485655
Exosomal proteins of other body fluids (saliva and urine)
117485655
Exosomal proteins of colorectal cancer cells
117485655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117485655
NCBI-ProteinID:
XP_033990163
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQMGNTCWELYCLEHGIQPDGKMPEVKAIGGHDDSFTTFFSDTGSGK
YVPRAIFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNTAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgcatctctatccacgtaggacaggccggtgtccagatgggcaacacctgc
tgggagctctactgtttggaacatggaatccagccggacggcaagatgcctgaagtgaag
gccatcggaggccatgatgactccttcaccaccttcttcagcgacactgggtctgggaag
tacgtccccagagccatctttgtggacctggaaccaactgtcattgatgaggtgcgtaca
ggaatgtaccgtcagctatttcacccggaacagctgatctccggaaaggaagatgcagcc
aacaactacgcccgtggacactacaccatcggcaaggagatcattgactctgtcctggac
agaatccgcaaactggctgatcagtgcacgggtctccaaggcttcctggtcttccactcc
tttggtggaggcacaggctctggtttcacctccctgctcatggagagactctccgttgac
tttggaaagaagtccaagcttgagtttgccatctacccggccccccaggtttccacagct
gtggttgagccttacaactccatcctgaccacccacaccaccctggagcactccgactgt
gccttcatggtagacaacgaggccatctacgacatctgccgcagaaacctagatattgaa
cgcccgtcttacaccaacctgaacaggctcatcagccagattgtgtcttcaatcacagcc
tcgcttcgcttcgatggagccctgaatgtcgacctcacggagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctatgctccagtcatctctgcagagaaa
gcctaccatgagcagctgtccgtagctgagattacaaactcttgctttgagccagccaat
cagatggtgaagtgtgatcctcgtcatggtaaatacatggcctgctgtctgctgtatcgc
ggtgatgtggtgcccaaagatgtcaacacagccattgctgccatcaagaccaaacgctcc
attcagtttgtggactggtgccccacaggcttcaaggtgggcatcaactatcagcctcca
acagtggtccccggtggagacctggccaaggtgcagagggctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggcccgtctcgaccacaagtttgacctcatgtacgcc
aaaagagcctttgtccactggtatgttggggagggcatggaggagggagagttctccgag
gccagagaagatatggctgccctggagaaggattatgaagaggttgggatcgattccttt
gaggaggatgaggaaggagaggaatattaa
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