Trematomus bernacchii (emerald rockcod): 117485690
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Entry
117485690 CDS
T09643
Symbol
fbxo38
Name
(RefSeq) F-box only protein 38 isoform X1
KO
K10313
F-box protein 38
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117485690 (fbxo38)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117485690 (fbxo38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
117485690
NCBI-ProteinID:
XP_033990228
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MGPRKKASKPQPVVGSSGGEVLLRPSEPKDYINELSHEVLCHIFRYLPMKDIMCMECLSR
KLREAVTLYLRVVKVVDLCAGRWWEYMPSGFTDGSFLLLLKKMPDLEQLYGLHPRYLERR
RVRAYEAFSIPGVLEALQACPNLLGVETSHLELVEAIWNYMPQVHILGKFRNRNGAFPIP
AENKLTIPITAKIQTLHLVGVNVPEIPCVSMLRHLYLKWVRLTKPQPFKDFLCVSLRTFV
MRNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTI
VFGACKNSLEVDLGYLIITAARRLHELRIQPSLTKDGVFSALKMAELEFPQFETLHLGYV
DEFLLQCKMTHSELVKYGLADVIENPGIITDIGVKVVNEVFTNIKYLLIYNCPHLHNPHH
WITDQSRWSRLVDLTLVRCHAIKLESFSQFIEALPSLEFICLDQMFREPPKGCARVGLSA
GTGIGVSSALVSNQNSNNDNDNNNNHHHHNNEPNMPPAPPPVNIINNNNNNNQRQQQEHN
AAEVNGMEDEEEEEEEVMLEEENMEAEHQMELKGAQGEVRAEGADAAPGPSRLAETPQRP
DEEQAGPSGLVQQNRAAGAAVPKPPPVISDSDSEEEECLVSRLMPASCLQQPASCAEGKG
KTPLRRSNNVAGSAADSPDLTKAQLSESSCEKSCQVTSEQIKADMKAAADTSRRTSAKGT
EAAARLGGDTGTGRGPGGRPLTGSAAWAGPGAASSRQVGGCGRVVMGTSHRATTTTERAT
GTGRPSEGPEGPSGAGTEKSSACVDNGAPRCAAVNHAYRRASLLPAQGERPAPADGSESQ
HGQPGDKDFVPRRPLTRSCTRMTPVSLISETDLSRARPRVAVRRKRMADKSTSTSDPVTE
DDHVQVLSLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKQLRVESAPIVNRF
DFAQCKKLDMEQVLDQILRMPPERNRIIYMRPMHQIDSVGLERQLFQGPYPYHIAIVHEF
SNPPNIRNKVRIRSWMDTIANISQELIKYEFFPEASRTEEDVKKYPKYPWGRDIYTLEGV
VDEAPYSMITDFPWLRTLRAADPNSYARYDFEDDESTTIYAPRRKGQLSADICMETIGEE
ISERRQSKRGVFQRVVVLFLHHCDTPGEPVDDDYI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaggaagaaggcctctaaaccgcagcctgtggtgggcagcagtggaggggaa
gtgctcctgagacccagtgagcccaaagactacatcaatgagctgtcccatgaagtcctc
tgtcatatattcaggtaccttcccatgaaggacatcatgtgtatggagtgtctgtccaga
aagcttcgagaagctgtgactctgtacctgcgcgtggtcaaggtggtggacctgtgtgcc
ggccgctggtgggagtacatgccttcaggctttacagatggcagttttctgctccttttg
aagaagatgccagatctggagcagctatatggcctccaccctcgatacctggagaggagg
cgagtccgagcctacgaggctttcagtatacctggagtccttgaggcactacaagcctgt
cccaatctgctgggcgtggagacgtcccacctggagctggtggaagccatatggaactac
atgcctcaggttcatatactggggaagttccgcaaccgtaacggggcctttcccattcct
gctgagaacaaactgaccatccccataactgcaaagatccagaccctacatctcgtgggt
gtgaatgtcccagagatcccctgcgtgtccatgctgcgccatctttacctgaagtgggtc
cgcctcaccaaacctcagccgtttaaggacttcctgtgtgtgagcctgagaacctttgtc
atgcgcaactgtgcagggccaacgaactccctcaaatacgttcccctggtaacgggttta
gcatcagctcggaaccttgagcagttggaactggtgagggttcccttcctgggggggctg
atccaacatgtggtggaagacagctggaggtcaggaggatttcggaacctccacaccatt
gtgtttggagcgtgtaagaactctctggaagtggacctgggttacctcatcatcactgct
gctcgcaggcttcatgagctgcgtatccagccttctctgaccaaagatggcgtcttctca
gccctgaaaatggctgaactagagtttcctcagtttgagacacttcatctgggatatgtg
gatgagttcctgctgcaatgtaagatgactcattcggagctggtgaagtatggtctggct
gatgtcattgagaacccaggcatcatcactgatattggagtgaaggtagtgaacgaggtg
ttcactaacatcaagtacctgctgatctacaattgtcctcacctgcataaccctcaccac
tggatcacagatcagtccagatggagtcgtctggtcgatctcactctggttcgctgtcat
gccatcaaactggaatccttttcccagttcatcgaggcacttcccagcctggagttcatc
tgtctggaccagatgtttagagaaccacccaagggctgtgccagggtggggctgagtgca
gggactggtatcggcgtgtcctcagcacttgtcagcaaccagaactctaacaacgacaat
gacaacaacaacaaccaccaccaccacaacaatgagcccaacatgccccctgcccctcca
cctgtcaacatcatcaacaacaacaacaacaacaaccagagacagcagcaggagcacaac
gcagcagaggtaaatgggatggaggatgaggaagaggaggaggaggaggtgatgttggag
gaggagaacatggaggcagagcatcaaatggagctgaaaggagcacaaggggaggtgaga
gctgagggggcggacgcagctccagggcccagtcgtctggctgaaacaccacaacgcccc
gacgaggagcaagcaggtcccagtggcttagtacagcagaacagagcagcaggggcagct
gttccaaagccccccccggtcatctcagactctgacagtgaggaagaggaatgtcttgta
tcaaggctaatgccagcttcctgtttgcagcagccagcttcctgtgcagaagggaaagga
aagactcctctgaggcggagcaacaacgtggccggatcagcggcagactcgcctgacctg
acgaaggctcagctgtcagagagcagctgtgagaagagctgccaggtgaccagtgaacag
atcaaagccgacatgaaggctgctgctgacaccagcaggaggactagtgctaaaggaacg
gaggctgctgctcgcctcgggggggacactgggacagggcggggccctggagggaggccg
ctcactggctctgctgcctgggctggacctggagcagcctcttccaggcaggtaggtgga
tgtgggagggtggtgatggggacctcccacagagcaaccacaaccactgagagagcaaca
ggaactggcaggccaagtgagggcccagaaggcccctctggagcagggactgagaagagc
tctgcttgtgtggacaacggggctcccaggtgtgctgctgtcaaccatgcctacaggaga
gcatcactgctgcctgcacagggagagagacctgcccctgctgacgggtcagagtcacag
cacggtcagcccggagacaaggactttgttcctagaagacctttgacccgatcttgcact
cgtatgacccctgtgtcgctgatatctgagacagatctttcaagagccaggcctcgagtc
gcagtgaggaggaaacgaatggctgacaaatccaccagcacctcggaccctgtcaccgag
gacgaccacgtacaggtgttgtctctgaagagtaagaacctggtgggcatcactctgact
aactgtggaatcactgacctggtcctcaaagactgccccaagatgatgttcatacatgcc
accagatgtcgagtgttgaagcagctgcgagtggagagcgcacccatagtgaaccgcttt
gatttcgcccagtgtaagaagctggacatggaacaggtcctggatcagatactgagaatg
cctcctgagaggaaccgcatcatctacatgcgccctatgcaccagattgactctgtggga
ttggagcgtcagctcttccaggggccctatccctatcacatcgccatagtgcatgagttc
agcaaccctccaaatatacgcaataaggttcgcatccgcagctggatggacaccatagcc
aacatcagccaggagttgatcaagtatgagttcttcccagaggcctcaagaacagaagag
gatgtgaagaagtatcccaaatacccctggggccgggacatctacacactggagggggtg
gtggacgaggccccctacagcatgataacagacttcccctggctgaggaccctgagggca
gcggaccccaacagctacgcccgctacgactttgaggacgatgaaagcaccaccatctac
gcacccaggcgtaaaggccagctgtcagccgacatctgcatggagaccatcggggaggag
atctcagagcggaggcagagcaagagaggagtcttccagagggtcgtagtcctgttcctc
catcactgtgacacaccaggagagcctgtggacgatgactacatctag
DBGET
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