Trematomus bernacchii (emerald rockcod): 117485752
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Entry
117485752 CDS
T09643
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117485752 (smarcal1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117485752 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DUF7480
DEAD
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
117485752
NCBI-ProteinID:
XP_033990324
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MSNQLTTEQQRKIDENRRRALERRAQRLGQTISDNKQTSADSTSTSVQVQTSKRRLDSDP
AAAPHRETLSSASAPKRFVPPFKKDSGSLNNFNQGSKQQLLSTSGNKIHQNTNSASTRQI
QVIDPLPQHVSSPVLSTGGSFGVKPAHPKPNLTSNSSDGAVVPFYKQTRKPSQSPVAPLS
SPSSTFNAVPAKKPAISVRGKCVAHTEGRFRVEVGYHAQLIVVYKSIPSKNYDPATKMWN
FSLEDYRVLMEEAAAVASVSLRPLEGMEALDVVAATSAACDGAALGALLKLCKGWQKPGA
TVQGQCVLVSPTKFEVDIGYHVDVIAACKQMPTKSYDLKTKKWSFSLADYKRLLDVLSGI
AAVEVEPLPRAIVQAFSARFDGTEARSLDVPEADLSSIDPSLTCSLMPFQREGVNFAVSK
QGRLLLADDMGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLSPDSIN
VVVKAKENLHAGLVNIVSYDLLSRIDKQQLATTFNILIMDESHFLKNMKTARCKAALPLL
KAAKRVMLLSGTPAMSRPSELYTQILAVKPTLFPRFHEFGMRYCAAAQSTWGWDYSGSSN
LGELKLLLEECLMLRRLKSEVLSQLPAKQRKVVTVTIEGVNGRIKAALSAAANQLANQQR
NKKEEKEALLVFYNHTAEAKLQAIMEYITDMLECGREKFLVFAHHKLVLDHISSELGKKN
VSFIRIDGSTPSADRQLLCNRFQSSTQTCVAVLSITAANMGLTLHAADLVVFAELFWNPG
ALVQAEDRVHRIGQTSNVNIHYLVAKGTADDHMWPMIQQKMNVLEQVGLSESNLSDKAVI
ASFHSKDPNQRSIMEMFQRSFTAGDEMDDALLLEAADDWDAAPPENSSAQHHGVAGQNPS
KRSIKDHFSR
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagctgacgacagagcagcagcgaaagatcgatgaaaacagacgcagagct
ttggagagaagagcacaaagacttggacagactatcagcgacaataagcagacctcggca
gactccaccagtacttcagtgcaggtacagacctccaaacgtcgactcgactctgatcct
gctgctgctcctcacagagaaaccctgagctcagcttctgcacctaaacggtttgttccg
cccttcaaaaaagactctgggagcttaaataatttcaaccaaggctcaaagcagcagcta
ttatctacctctggcaacaaaatccaccagaatactaactctgcatctaccagacagata
caagtcattgacccacttcctcaacatgtgagcagccctgtcttgtctactggaggaagc
tttggtgtgaagccagctcatcccaaaccaaacctaacctccaacagctctgatggtgca
gttgtgcctttctacaagcaaaccagaaaaccgagccagagtcctgtggcaccgctttcc
tccccctcatcaactttcaacgctgtacctgcaaaaaagcctgccatctctgtaagagga
aaatgtgtagctcacacagaaggccgtttcagagtagaagtgggctaccacgcccagctg
attgtcgtttacaaatccatcccatcaaagaactatgacccagccacaaagatgtggaac
ttcagtctggaggactatcgagtgctaatggaggaagctgctgccgtggcttctgtgtct
ttgcggcctctggagggaatggaggcgttggacgtagtggcagccaccagcgcagcctgt
gacggggcagcactgggggcgctgctgaagctgtgtaagggctggcagaaacctggggcc
acagtgcagggccagtgcgtcctggtgtccccgacaaagtttgaggtcgacatcggttac
catgtggacgtcattgcagcatgcaagcagatgccaacaaagagctatgacttgaaaaca
aaaaagtggagtttttcccttgcagactacaagagactcttggatgtcctcagtgggata
gcagcagtggaggtggagcctctgcccagggcaatagtccaggctttctctgccaggttt
gatgggacagaagccaggtctttagacgtccctgaggccgacctctccagcatcgacccc
tcgctcacctgcagccttatgcccttccagagggaaggagtcaattttgcagtgtctaaa
caaggccgcctcctcctggcggatgacatgggcctggggaagacggtgcaggccatctgc
atagctgcttactacaggaatgagtggcctctgctggtggtggctccctcctctgtgcga
ttcacctgggccgaggccttcagacgctggctcccctccctgagtcctgacagcatcaac
gtggtggtgaaggccaaagaaaatcttcacgctggtttggtcaacatcgtcagctacgac
ctgttgagccggatcgacaagcagcagctagcaaccaccttcaatattctcatcatggat
gagagtcactttctgaagaacatgaagactgctcggtgtaaagcagccttgcctctgctg
aaggcagcgaagagagtgatgcttctgtccggcacccccgccatgtccagaccctctgag
ctctacacacagatcctggccgtcaaacccacactgttccctcgcttccatgagttcggc
atgcgctactgcgctgctgcacagtcgacttgggggtgggactactcgggctcctctaac
ctgggagagttgaagctgttgctggaggagtgtttgatgttacgccggctcaaaagcgaa
gtcctctctcagcttcctgctaaacaacgcaaggttgtcacggtgacaatagagggtgtc
aacggccgcataaaagccgctctgtcagctgctgccaaccagttggccaatcaacagcgc
aataagaaggaagagaaggaagccctccttgtcttttataaccacacagctgaagccaag
ctgcaagccattatggagtacatcacagacatgctggagtgtgggagggaaaagtttctt
gtgttcgcccatcataagttagtcctggatcatatcagcagcgaactgggaaaaaagaat
gtgagttttatccgtattgacggctccacaccctctgctgatcggcagctgctgtgtaat
cggtttcagagctccactcagacctgcgtggctgttctgtccatcactgcagccaacatg
ggcctcacgctgcacgccgccgacctggtggtcttcgctgagcttttctggaacccgggg
gctctcgtgcaagcagaggacagggtgcaccgtattggacagaccagcaatgtgaacatt
cactacctggttgccaagggaacagctgatgatcacatgtggccaatgatccagcagaaa
atgaatgtcttggagcaagtgggattgtctgagtcaaacctctctgacaaagcagtaatc
gccagcttccactctaaggaccctaaccagaggagcatcatggagatgttccagaggtct
ttcactgcgggagacgagatggacgatgccctcttactggaggctgcagacgactgggac
gccgccccgcctgaaaacagttctgctcaacatcacggcgtggctggacagaaccccagc
aagaggagcatcaaagaccacttcagcagatga
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