Trematomus bernacchii (emerald rockcod): 117485889
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Entry
117485889 CDS
T09643
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117485889 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tben04050
]
117485889 (edar)
Cytokine receptors [BR:
tben04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117485889 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
SUR7
Motif
Other DBs
NCBI-GeneID:
117485889
NCBI-ProteinID:
XP_033990480
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MTISLSFSPGPQQEDANMSERRSQKKSIFLSSLLVCCMFASAEYSSCGEYEFFNQTSNSC
QACPQCQAGQEPHMSCGYGVKDEDFACVPCPHGKYSKGRYEICRRHKDCDAFYKATVRAA
GTPDSDAECGPCLTGFFMLETRPRNLWMVCHSCQNAPRNTKECMSTSVKKEKTTIDPGST
TLFPHLPEDSTGQSHLATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKT
VEGQTNKQEDKKDVPDNVVIYSEKDEFDKLKGAPQKTVKSENDASSENEQLLSRSIDSDE
EAASDKQGSAETNTPNPCLVNLGNKPDLCLLSLGLLDRERACNGAPAHANGQANNTPSPN
HIGKVNHIASANHISTVNALNNNNKTPGMLQSRRKKILDLYGRACNVTEGLSPTELPFDC
LEKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLL
TRLVQIERLDAVESLCSDVLGSGEMAAAAGRQGNSTFHSQLVCTTPCPSPSQRCASV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttctctatctttctctcctggtccccagcaagaagacgcaaacatgtcagag
agaagaagtcagaagaaatccatctttctgtcctcattattggtgtgttgtatgtttgcc
agtgcggagtattccagctgtggagagtatgagttcttcaatcagaccagcaacagctgc
caggcctgccctcagtgccaggcaggacaggagccgcatatgagttgtggctacggtgtg
aaggatgaggactttgcctgtgtgccgtgcccgcatgggaaatattccaaagggaggtat
gagatctgcagacgccataaggactgtgacgctttctacaaagccactgttagagcagcg
ggaactccagacagcgatgccgagtgtggaccctgtttaactgggtttttcatgctggag
accagacccagaaacctctggatggtttgccactcctgccagaacgcaccacgcaacacc
aaagaatgcatgtcaaccagcgtaaaaaaggaaaaaactacaattgaccctggcagcact
actttgttccctcaccttccagaagattccaccggacaaagtcacctcgcaacagctctc
attatcgccatgtcaactattttcatcatggccatcgccatcgtcctcatcatcatgttt
tacatcctgaaggccaaaccaagtggccaggcatgctgctcagggcaagttgtgaagaca
gtggagggtcagaccaacaagcaggaagacaagaaagatgtccccgacaatgtggtgatc
tactcagagaaagatgagtttgacaaactgaagggtgctcctcagaagacagtaaaaagt
gaaaatgatgcatcatccgagaacgagcagctgttgagtcgtagcattgacagcgacgag
gaggcggcgtctgacaagcaaggctcagccgagaccaacacccccaacccctgcctcgtc
aacctgggcaacaagcccgacctctgcctgctctctctgggcctcctggatcgggagcga
gcctgcaacggggccccagcccacgccaacgggcaggccaataacaccccgagtcccaac
cacatcggcaaagtcaaccacattgccagcgccaaccacatcagcactgtgaatgcactg
aacaacaacaataaaaccccagggatgctacagagtcgaagaaaaaagatcctggatctg
tatggcagagcctgcaatgtgacagagggcttgagccccacagagcttcctttcgactgt
ctggagaaggccagccgcatgctgagctcgtcttacagcagcgaggcggccgtggtgaag
acgtggaggcacctggccgagagcttcgggctgaagcgcgacgagatcggtggcatgagc
gacggcctgcagctcttcgagagggtgagcacggcgggctacagcatccccgacctcctg
acccgcctggtccagatcgagaggctggacgccgtggagtcgctctgctcggacgtgctg
ggcagcggggagatggcggcggctgcaggtcgccagggcaatagcacttttcacagccag
ttggtctgtacaaccccatgcccgtctccatcccagcgctgcgccagcgtctaa
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