KEGG   Trematomus bernacchii (emerald rockcod): 117485939
Entry
117485939         CDS       T09643                                 
Name
(RefSeq) histone deacetylase 4-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    117485939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tben03036]
    117485939
Enzymes [BR:tben01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     117485939
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     117485939
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln TFIIA
Other DBs
NCBI-GeneID: 117485939
NCBI-ProteinID: XP_033990536
LinkDB
Position
Unknown
AA seq 1113 aa
MDQQRAACGTSKTRSTQPFVDVSSASLPMQVPPGSSAILPMDLRVVDHHPHLHQHHHHHQ
QPSFGLVPQPHPTAPVSTACPTSSEPGRGPVINHQEQQLQQELVTLKHKQQLQRQILIAE
FQRQHEQLSRQHEVQLQEHIQSCVSLHQHQQDLLALKHQQELLEHQRKMEHQRHEQEIEK
KQREHKLLQLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSLNHCMPGDPRFWYGK
TQHSSLDQSSPPQTALSAYCHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSS
PLLRRKDGPITTAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPNENGVTISSCPGEVSL
LQRLAARDGSVSHLSLYTSPSLPNITLGLPASSVVSGHRDGDSRLALPALQQSIGLTPPF
LPTAHLPSYLASSALDREGAGGGTAGHNPLLQHMVLLEQSHNPMVGLAGLQLTSPSVSKL
ARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQQFQQQQHIINKIMSKP
GDQVSAVGSSASGPGRQHQSHPEETEEELREHQGLSLAPSSPMSAQETGPLRGMVIKQEP
QDPQEHEEREKRERLRDQEQDFMFRQQQALLLEQQRIHQLRDYQASMEKAGLSVSFAGHR
PLSRAQSSPASASFPMVVQEPPAKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHAGRIQSI
WSRLQETGLRAHCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCSVSPMFVRLPC
GGVGVDNDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMG
FCYFNSVAIAAKLLQQRLNVSKVLIVDWDVHHGNGTQQAFYADPSVLYLSLHRFDDGNFF
PGSGAPDEVGSEAGVGFNVNMAFTGGLEPPMGDVEYLAAFRTVVMPIANEFAPDVVLVSS
GFDAVDGHAPPLGGYKLTAKCFGYLTRQLMALAGGRLVLALEGGHDLTAICDASEACVSA
LLGNELDPIPDELLQQRPNANAVHSMEKVLEIQSKYWRSLLRSASTLGCSLSEALRCDAD
EAETVSAMASLSVANKHIGKRAEEEPMEEDAVM
NT seq 3342 nt   +upstreamnt  +downstreamnt
atggaccagcaacgagcagcctgtggaacttctaaaaccaggagcactcaaccatttgtg
gacgtgagctcggcatcactgcccatgcaggtgccccccggctcctcagccatccttccc
atggatctgcgcgtagtggaccaccacccccacctccaccaacaccaccaccaccaccag
cagccctctttcggcctggttccccagccccatcctacagcgcccgtctccacagcgtgt
cccacgtcctcggagccaggccgcggcccagtcatcaaccaccaggagcagcagctgcag
caggagctggtgacgctcaaacacaagcagcagctccagagacagatcctgatcgctgag
ttccagaggcagcatgagcagctgtcgcgccaacatgaagtccagctgcaggaacatatc
cagtcttgtgtctctctccaccagcaccaacaggacctcctggcccttaagcaccaacag
gagctgctggagcaccagaggaagatggagcaccagcgtcacgagcaggagatagagaag
aagcagcgggaacacaaactcctgcagctgaaaaacaaggagaggggacaggaaagtgca
gtcgctagtactgaggtgaagatgcgacttcaggagtttgtcctgaacaaaaagaaagcc
ctggctcagcgcagcctgaaccactgtatgcccggagacccgcgcttttggtatggaaaa
acccagcacagctctttggaccagagctctcctccccaaactgcattgtcagcgtactgc
cacccaatgctgggcacatacgactcaaaagacgacttccctctccgcaaaacagcctct
gagcccaacctcaagcttcgttcccggctaaagcagaaagtgacagagcgccgcagcagc
ccgttgctccgaaggaaagatggtcccatcactactgccaagaagcgttccctagacgtg
gccgagtctgcatgcaacagtgcacccggctcaggtcccagctcccccaacaacagctcc
agtaacatccccaatgagaacggggtcaccatctccagctgcccaggagaggtctctctg
cttcagaggttggcagcacgggatggttcagttagccatctctcgctctacacctcccct
tctcttcctaacatcaccttgggactgcctgctagctctgtggtgtcaggacaccgagat
ggtgacagtcgtctggcactgcctgcgttacagcagagcattggtctgacccctccattc
ctgcccactgcccacctgccctcctacttggcatcctcggctctggacagggagggggcc
ggagggggcacggctggtcacaaccccctcctccaacacatggtgctgctggagcagagc
cacaatccaatggtgggtcttgctggcctccagctaacgtcgccttctgtctccaaactt
gcgcggggccaccgccccctcgggaggacccagtcggcccccctgccccagcagcagtgt
ggacaagcccaggccctgcagcagctggtcgtccaacagcaacaccagcagttcctggag
aaacacaaacaacagttccaacagcagcagcacatcatcaacaagatcatgtctaagccc
ggggaccaggtgtcggcggtgggctccagcgcctcggggcccggccggcagcaccagagc
cacccggaggagacggaggaggagctgagggagcaccagggcctctccctggcgccctcc
tctcctatgtccgcgcaggagacggggccccttcgagggatggtcatcaagcaggagccg
caggacccccaagagcacgaggagagagagaagagggagagactaagagaccaagagcag
gacttcatgttccgacagcaacaggctctgctgttagagcagcagcggatccaccagctg
agggactaccaggcctccatggagaaagcgggattatcggtcagcttcgccggacaccgc
ccgctctccagggcgcagtcgtcccccgcctccgcctccttccccatggtggtgcaggag
ccccccgccaagcctcggttcactacaggtctggtgtacgactctttgatgcagaagcac
cagtgtatgtgcgggaacaccaccagccacccagagcacgccggccgcatccagagcatc
tggtcccgcctgcaggagacaggcctcagggcgcactgcgagtgtatccgcggcaggaag
gcctcactggaggagttacagacggtccactccgaagcacacgtcctgctgtacggaacc
aacccactgcggcagaaactggactgttcagtgagccccatgtttgtgaggttaccatgc
ggaggagtaggggtggataacgacaccatctggaatgaggtccattcatccagcgcggct
cgtctggccgtgggctccgtggtggagctggtcttcaaagtagcatcgggagaactcaag
aatggttttgctgtagttcgaccacctggacaccatgctgaggagagcacgccaatgggc
ttctgttacttcaactcagtcgccatagcagccaaactgctgcagcagagactcaacgtc
agtaaagtcctcatcgtggactgggacgtccaccatggtaacggtacccagcaggccttc
tacgcagaccccagtgttctctacctgtcgctgcatcgctttgatgatgggaacttcttc
cctggcagtggagcacctgacgaggtgggcagtgaagcaggcgtaggcttcaacgtgaac
atggcctttacaggaggacttgaacctcccatgggtgacgtggagtacctggctgctttt
aggacggtggttatgccgattgccaacgagtttgccccagacgtggttctggtatcttca
ggctttgatgcggtcgacggacacgctccacccctgggaggatacaaactcacagccaaa
tgcttcggctacctgaccaggcagctgatggctctggcaggcggtcgcttggtgcttgcc
ctggaggggggtcacgacctcacagccatatgtgatgcctccgaagcctgcgtctctgcc
ctgcttggcaatgagttggaccccattcctgacgagttacttcaacagagaccgaatgct
aatgctgtccactctatggagaaagttcttgaaatacaaagtaaatactggcgctcactg
ctgcgctccgcctcgacactcggttgctctctgagcgaagcccttcggtgtgatgcagac
gaagcagagaccgtctcagctatggcctcactgtctgtcgccaacaaacacatcggaaag
agggctgaagaggaaccaatggaagaggacgctgtaatgtaa

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