Trematomus bernacchii (emerald rockcod): 117486392
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Entry
117486392 CDS
T09643
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117486392 (mms19)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117486392 (mms19)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117486392 (mms19)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117486392 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
API5
ZSWIM1-3_C
PP4R3
Sec7-like_HUS
CLASP_N
Motif
Other DBs
NCBI-GeneID:
117486392
NCBI-ProteinID:
XP_033990705
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MAADSALLLSLVEEYVSGLQDSKAKDTATAVKNGEFTVLQLVEALGLSLTSSQPHTRARG
VQLLSEVLHECYGGLTEKEVEVLLVFYENRLKDHHVITPPVLQGLRALTKCTVLPPGSAV
SMLRSLFQDVHVQSLMLTERACVYNMLINLMAIREAELKGLGPDFVFGFVQSMDGERDPR
NLLLAFQIAKGIVLRGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITREELILTLRDV
LAGTPRFAEFLLPLIIEKLDSDVQSAKLDSLQTLTACVSQYEHKDLAEFLEGLWASLRRE
VFQTSSEKIESAGLAAITAITSCLSRSVLNSDSEDSLNTFLELVLKDCKHHLCEPDLKLV
WPSAKLLQAACSASFRASCIITAAIMPSLIEQYTNRAQCSQRRTLLEVVQKFIQSVKTCQ
TSESEDSVFVAFRPSLCSMVFSALTETNSSLQVTACSVLTSLAQQPGLLLDSDIELAVDH
LTRLLLTEQDHTVSVAVVDCAGALAELHPAAFISNFIPRLKAEMFSEPMDQDNNRAESEQ
LSHHAVRQRCLSALAAVSIKPSVVQESTPVLLQVLSAAHTGGFSVEEVVLACRSLQRIAE
QVPDSEETGRCFHDVIIPRLLSLALQAALQGEDGNRSPLLEEAVLSSMVPIISASCSRLQ
PTLALQTASRAVSLFLDGDVSFLPDNSFPSNIQLLKQQHSWTQSQMVCLLVGCVCSLPRS
VEVPRVDELLSALEEMSCSVLHPLSYTSAAKCLSGLLNKKPQGDSLDSRIHSTMKRVCSE
LDSSSSSVHTQAFTLMIWVAKALLLRYHPLFTTLTDKLFSLLDDAALGPLAADGFSLLMS
DSPDILNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKPNFLKALSNIVNKLPKQV
QLTELPALLSLLLEALSCPDLGVQLSTLSCLQPVLVDPPPSLIQQLEALIGRLLALTGSP
DMEVRISSLRCIHAVSQFPEHEILPVRARVLRALARPLDDRKRLVRREAVHARNDWFLVG
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacagtgcgctgctgctgtctctggtggaggagtatgtctctggactgcag
gacagcaaagccaaagatacagcaacagctgtcaaaaatggagagtttacagttctgcag
ctggtggaggcactgggactgagtctgaccagctctcagcctcacactcgagccagagga
gtccagcttctctccgaagttttacacgagtgctatggaggtcttacagagaaagaagtg
gaagtgctccttgtcttctatgaaaaccgtctgaaggaccatcacgtcatcactcctccg
gttttacaggggctcagagcgctgacaaagtgtacggtgctgcctcctggctcagcagtg
tccatgctgaggtctttgttccaggatgttcacgttcagtctttaatgctgacggagaga
gcctgcgtctacaacatgctcatcaacctcatggcgatcagagaagcagaactgaagggc
ttgggaccagactttgtgtttggttttgtccaatcaatggacggagagagggatcctcgt
aacctgctgttagcgttccagatcgccaaaggcatcgtcctgcgaggttatgatctaggt
aaattcacagaggagctgttcgaggtgacgtcctgctacttccccatcgacttcagcccc
cctcccaacgacccccacggcatcaccagagaggagctgatcctcacgctgagggacgtc
ctcgccgggacaccaagatttgcagagtttctgttgcctctcatcattgagaagctggac
tcagatgttcagagcgcgaagctggactcgctgcagactctgactgcttgtgtgtcccaa
tacgaacacaaggacctggcagaattcctcgagggactgtgggcgtcactgcgcagagag
gtgtttcagacatcaagtgaaaagatcgagtctgccggcctcgcagcgatcaccgcgatc
acttcctgtctgtctcgctccgtactcaactccgactctgaagactccctcaacaccttc
ctggagctcgttctcaaagactgtaagcaccacctgtgtgagccggacctgaagctggtc
tggccgagtgctaaactcctccaggccgcctgcagcgcctccttcagggcgagctgcatc
atcacagccgccatcatgccctccctcatcgagcagtacaccaacagagctcagtgttcc
cagagacgcacgttactggaggtggtgcagaaattcatccagtcagtgaaaacctgccag
acttcagagagcgaggacagtgtgtttgtagctttccggccctctctgtgcagcatggtg
ttctccgctctgacggagactaactccagtctgcaggtcacagcctgctctgtgctcaca
tctctggctcaacaaccaggtctgctgctggactctgacatcgagctggctgtggatcac
ctgaccagactgctgctgacggagcaggaccacacagtgagtgtcgctgtggtggattgt
gccggagctttagcagagttacaccctgcagcattcatcagtaacttcatcccaagacta
aaggcggagatgttttccgagcccatggatcaggacaacaacagagcagaatctgagcag
ctttcccatcatgcagtgcggcagcggtgtctctccgctctggctgcagtgtccataaag
cccagcgtcgtccaggagagcacacctgtcctgctgcaggtcctcagcgctgctcacaca
ggtggtttctcggtggaggaggtggtgttggcgtgccggagccttcagaggatagcggag
caggttccggactcggaggagacggggcgctgcttccatgatgtcatcatcccgcgcctg
ctgtctctggctctacaggcggcgctgcagggtgaggatggtaatcgtagtcctctcctg
gaggaggcggtcctctcctccatggtgcccatcatcagcgcttcctgctcccggctgcag
cccacgttggcgctgcagacggcatcgagagccgtgtctctgttcctcgatggagacgtt
tcatttctgcccgacaactccttcccttcaaacatccagctgctcaagcagcagcactcg
tggactcagtctcagatggtgtgtctgctcgtgggatgtgtgtgttcgttacctcgcagc
gtggaggttcctcgggtggatgagcttctgtcagctctggaggagatgagctgctccgtc
ctccacccgctctcctacacctcggctgctaaatgcctttctggtctgctgaacaagaaa
ccacagggtgattctctggacagcaggattcacagcacgatgaagagggtctgcagtgag
ctggactcttcgtcttcatcagttcacactcaggccttcaccctcatgatctgggttgcc
aaggctctacttctccgataccaccctctgttcaccacactgactgacaagctcttctct
ctgctcgatgacgccgctctcggtcctctggcggccgacggtttctcgctgctgatgagc
gactcgcctgatatcttgaaccgcggttgccacgccgacgttcgcatcatgtaccgccag
cgcttcttcagcgagaattcagccaaattagtccaaggtttcaacgctgcgccgcaagag
aagaagcctaacttcctgaaggctctgtctaacatcgtcaacaagctgccaaagcaagtc
cagctcactgagctcccagcgctgctgtccctgctgctggaggctctctcctgtcctgat
ctgggggtccagctctccacgctgtcctgcctgcagcccgtcctcgtggacccgcccccc
tccctcatccagcagctggaggctctgattggccgcctgctggccctcaccggcagcccc
gacatggaagtaaggatctcctcactgcggtgcatccacgctgtttcccagttccctgaa
catgagatcctgccggttcgagcccgggttctgcgagctctcgcccgcccgctggacgac
aggaagcggctcgtgaggagagaggcggtgcacgcacgaaacgactggttcctggttgga
agttga
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