Trematomus bernacchii (emerald rockcod): 117486440
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Entry
117486440 CDS
T09643
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117486440 (msx1a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
117486440 (msx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
117486440
NCBI-ProteinID:
XP_033990764
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MAPSIAMSALTAALKTEELPHRSVLVSRVEMQTSLSPAEEPVKPKVAILPFSVEALMADR
KPSREVVSPDALSVPGTSHALGKGIRMGSFGSLDTPALPMSSPFSVGDIMNMSDDVLIKP
ESPDSNERNSWLQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFRQK
QYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGISF
PLGAHPASYGSHPFHRHSLPVSPMGLYAAHVGYSMYHLA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgatcgccatgtcagctttaaccgctgctttgaaaaccgaagagcttccc
caccgctcagtgctcgtcagccgggtcgagatgcagaccagcctgagtcccgcggaggag
cccgtgaagcccaaagttgctattttgcccttcagcgtcgaggcgttgatggccgatagg
aaacccagcagagaggtggtatcaccggatgccctgtccgttcccgggacgtcccatgcg
ctggggaagggcattaggatgggctcgttcggtagtctggatactcctgctttacccatg
agctccccgttttcggtgggcgacatcatgaacatgtctgacgacgtgttgataaaaccc
gagagcccggacagtaacgagagaaattcatggctacagagtccccgtttttctcccacg
cctccacgaaggctgagtcctcctgcgtgtcccctgcgtaaacacaagacgaacagaaag
ccccggacccccttcaccacgtcccagctgctggctctggagaggaagttccggcagaag
cagtacctttccatcgccgagcgcgcagagttctccagctcccttaacctgacggaaaca
caggtgaaaatctggtttcagaacaggagggccaaagccaagcggctgcaggaggcagaa
cttgaaaaattgaaaatggcagctaaacctatgctgcctccagctttcgggatttccttt
cctctcggtgcgcaccccgcgtcctatggctcgcacccgttccacaggcactcgctgccg
gtttcccccatgggactgtacgcggcgcacgtcggatacagtatgtaccacctcgcttga
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