Trematomus bernacchii (emerald rockcod): 117486484
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Entry
117486484 CDS
T09643
Name
(RefSeq) dynein intermediate chain 1, axonemal-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117486484
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117486484
04812 Cytoskeleton proteins [BR:
tben04812
]
117486484
Cilium and associated proteins [BR:
tben03037
]
Motile cilia and associated proteins
Dynein arm
117486484
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117486484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
WDR55
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_RSE1_2nd
Beta-prop_LRRK2
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_ELP1_2nd
WD40_2
Motif
Other DBs
NCBI-GeneID:
117486484
NCBI-ProteinID:
XP_033990827
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSHLSQVSLLNIRNMIAYCFSQERSYKPTIAVDQMAVHFVLEGSLLHEDSDEARRQRANE
GLPEETAAVDTGVEPDEEEPETSDTPVEDGGEVEEAGEEDRPDSVASKTDRKEPKVTNQF
NFSERASQTLNNPLRERSCQTDPPPRGTFSATATQWGIYDAYVEELQKQETNKEKQKAVA
SKKDNDKGTKKTLLMETQTDDITKVGKAAKIMERIVNQNTFDDIIQDFKYFEDPSDEFRG
QKGTLLPLWKFQYDKAKGLSVTALCWNKKYQDLFAVGMGSYDFSKQGRGMLVYYSLKNSS
YPAYIYPTPSGVLCLDIHEQHSYLVAVGLYDGCVAVYNNKKKDGSEPMYKSTAKTGKHTD
PVWEVRWQSDDMDNNHNFCSVSSDGRVVSWTLVKNELVFTDIIRLSLNGAVSEGPNQLPA
IACGTSFDFHKQIDYLFLVGTEEGKIHKCSKTYSSQFLETYNAHSMTVDAVKWNHFHPKV
FISCSSDWTVKIWDHTINTPMFTFDLKAAVGDVAWAPYSSTVFAAVTTDATVHVFDLSIN
KYEAICQQLVAAKKKTKLTHIEFNPIHPIIIVGDDRGNVISLKLSPNLRKKPKVKKGQDQ
PKDSEMEVAKMEKLLSLLREPEQSTV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacctcagccaggtgtctctgcttaatattcgtaacatgattgcatattgtttc
tcccaggaacgttcctacaagcctaccattgctgtggatcagatggctgttcactttgtt
ttggagggcagccttttgcatgaagactctgatgaggctcgtagacagagggccaacgag
ggtctccctgaggaaactgcggcagtcgatactggagtggaacctgatgaggaggaacca
gaaacatcggatacacccgtagaggatggaggggaagtggaggaagcaggagaagaggac
agaccagacagtgtcgcctctaaaaccgacaggaaggagccaaaagttactaaccagttc
aacttcagtgagagggcctcccagaccctcaacaacccactgcgggaaagaagctgccag
actgatcctcctccacgcggcaccttctccgccacagctactcagtggggcatctatgat
gcgtatgtggaggagctgcagaaacaagaaacaaataaagagaagcagaaggctgtagca
tcaaagaaagataatgacaaaggcacaaagaagacgctgctgatggagactcagactgat
gacatcaccaaagtgggaaaggcggccaagatcatggaacgaattgtcaatcagaacact
tttgatgacataattcaagatttcaaatactttgaggacccttctgatgagttcaggggc
cagaagggcacccttctccctctgtggaagtttcaatatgacaaagctaagggactgtct
gtcactgccctctgctggaataagaaatatcaggacctttttgctgtgggaatgggatcg
tacgacttcagtaagcaggggcgtggcatgctagtctactactccttgaagaactcttcc
tacccagcgtacatctatcccaccccttctggcgtcctgtgcctcgacatccatgagcag
cattcctacctggtggccgttggcctctatgacggctgtgtggctgtctacaacaacaag
aagaaggatggatcggagcctatgtataagagtacagctaagactggcaagcacacagac
cccgtatgggaggtgcgctggcagagcgatgacatggacaataaccacaatttctgttca
gtgtcatctgatggacgagttgtgtcctggactctagtcaagaatgagctggtctttaca
gatattatcaggctgtcactgaatggtgctgtctccgagggcccgaatcagctgcctgcc
atcgcctgtggtacctcgtttgacttccataagcagatcgactatctcttccttgttggc
accgaggagggaaaaatacacaagtgctccaagacttactcaagccagttcctggagacc
tataatgcccacagcatgacagtggatgcagtgaagtggaaccacttccaccccaaggtt
ttcatctcctgcagttcagactggaccgtcaaaatctgggaccataccatcaacactccc
atgttcacctttgatctgaaagcagcagttggtgatgttgcctgggctccatactcctcc
actgtattcgccgctgtcacaacagacgcaacggtccatgtctttgacctcagcatcaac
aaatatgaggccatttgccagcagctagtggcggccaaaaagaagaccaagctgactcac
atcgagtttaatcccatccatcctatcatcatagtgggcgatgaccgaggcaacgtcatc
agcctcaaactctccccgaacctccgcaagaaacccaaggtcaagaagggtcaggatcag
cctaaggattcagaaatggaagtagccaagatggagaagctcctcagtctgctgagggaa
ccggagcaaagcacagtttaa
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