Trematomus bernacchii (emerald rockcod): 117486527
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Entry
117486527 CDS
T09643
Symbol
slc6a1b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1b
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117486527 (slc6a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117486527 (slc6a1b)
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117486527 (slc6a1b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117486527
NCBI-ProteinID:
XP_033990906
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MATNGTKATDGHVLTEMANDAPTTTPNDKPKTLVVKVQKTQKELPERETWGGRFDFLLSC
VGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGMPLFFLETALGQYTSIGGLGVWK
LAPVFKGVGMAAAVLSFWLNIYYIVIISWAIYYLYNSFTTELPWQSCGNAWNTERCYNNY
SIADTKNLTSSVVEFWERNMHQMTDGLEKPGEIRIPLAITLAIAWVLVYFCIWKGVGWTG
KVVYFSATYPYFMLFILFCRGITLPGAIDGILFYITPNFEKLKESEVWLDAATQIFFSYG
LGLGSLIALGSYNPFKNNVYRDSIIVCCVNSFTSMFAGLVIFSIVGFMSNVTNRPIADVA
ASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPHALR
KRREIFIAVVCLISYIIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWFYGV
NNFYDNIEEMIGYKPCMWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLGDYVFPAWGQGVG
WCMALSSMLLIPGYMVYMFLTIKGTYKERLRMMFTPLKLVKAQENGPDQQTENQNQTPAN
EEAYI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacgggaccaaagccacggacggacacgtcttaacagagatggcgaatgac
gcgcccaccacaacgccaaacgacaaacccaaaaccttggtggtgaaagtgcagaagacg
caaaaggagttacctgagagagaaacgtggggagggagatttgactttcttctctcatgt
gtgggatacgcaatcggactcggaaatgtctggagatttccttatttatgtggaaaaaac
ggaggaggggccttcttgattccctactttttgaccctcatatttgccggcatgcccctg
ttctttctggagacggctcttggtcaatacacttctattggagggcttggagtgtggaag
ctggcccccgtgttcaaaggtgtgggtatggctgctgcagtcttgtccttctggttgaat
atctattacattgtaataatttcctgggcaatttactatctgtacaactccttcactacc
gagctgccatggcagtcttgtggaaatgcctggaacacagagcgctgctacaacaactac
agcatcgcagacaccaaaaaccttaccagctctgtggtggagttttgggaacgtaacatg
caccagatgactgatggcctggagaaacctggggagatcaggatcccgctggctatcacg
cttgccattgcatgggtcctcgtctatttctgcatctggaagggggtcggctggacaggc
aaagtggtgtacttctcagccacatacccttacttcatgctgttcatcctgttttgccgc
ggcatcactctacctggcgcaattgatgggatcctcttctatatcacaccaaactttgaa
aaactgaaggagtctgaggtgtggctggatgctgccactcagatcttcttttcctacggg
ctgggattaggctcgctgatcgctcttggcagttacaatcccttcaaaaacaacgtgtat
agagattctatcattgtctgctgcgtcaactccttcaccagcatgttcgctggcttagtc
atcttctccatcgtgggattcatgtccaatgtaacaaacagacccatcgctgatgtggca
gcctcaggacctggcctggcatttttggcttaccctgaggctgtgacccagctgcccatt
tctcctctctgggccatactctttttctccatgttgctgatgctgggaatcgacagccag
ttctgcaccgtggagggcttcatcactgcactggttgacgagttcccccacgctctccga
aaacgcagagaaatcttcatcgcagtcgtctgccttatttcttacatcattggactttcc
aacatcacacagggtggactgtacgtgttcaagctatttgattactactcagctagtgga
atgtgcctgctattcctggtcttctttgagtgcatctccatttcctggttttatggtgtg
aacaacttctatgacaatattgaggaaatgattggctacaagccctgtatgtggtggaag
ctctgctgggtcgttttcactccactcattgtggctggagtcttcctgttcagtgcagtg
cagatggttcccctcaccttgggtgactacgtgttcccggcctggggccagggggttggg
tggtgcatggccctctcctccatgctcctcatccctggctacatggtctacatgttcctg
acaatcaaaggcacatacaaagagcgtctgcggatgatgttcacgcctttgaagctggtg
aaggctcaggaaaatggcccggaccagcagacagaaaaccagaatcagacccctgccaac
gaggaagcctacatctag
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