Trematomus bernacchii (emerald rockcod): 117486569
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Entry
117486569 CDS
T09643
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04110
Cell cycle
tben04218
Cellular senescence
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117486569 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117486569 (rbl1)
04218 Cellular senescence
117486569 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117486569 (rbl1)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117486569 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
SLH
Motif
Other DBs
NCBI-GeneID:
117486569
NCBI-ProteinID:
XP_033990975
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTASETLENFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRTAKLSLIQFFSKMRKWADMSSLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRAD
GHVSPDQPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLYQKQILRGNEDNLTELLD
PQSFIDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKTVQETSASRNNAQSQM
KQHVEKSASLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVSGLRTAPSENMLQV
FRSCSRNPTESLLARVKTLGQTFKEHYTNDSEDMPGSHIDFAENRLKLAEILYYKVLENV
MVQETKRLPGKDMSVLLEQDMFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLTPFYFFK
VIEVFIRSEEGLSRDMVKHLNLIEEQVLDSRAWSADSALWSVLQAAGNKVPTVEEVNFSS
SLDTGSGPGSSGVQSHLPMLALSPIIHPRIREFRSGLGSARKDVPPSPLSLHDRYSSPAA
GSAKRRLFGDDSPAPLTATLSPMSMSSPAKRLTFTSSSTLRIGGQGGGGTVLSIPLQGLN
NDRTITLIPVQPCDSSGTITAQFLLTTSPSRPPPPPPMTSDPPATGSGRPRRTGSLALFF
RKVYHLASVRLRDLCVKMDVSSELRGKIWTCFEHALVHCTALMKDRHLDQLMLCCVYIIS
KITKETHTFHDIMKCYRGQPQASSHVYRSVLLRHTLREQVTDENMEVDPVSGGESAEKTN
QASGEVNADQSGEEERGDLIQFYNSVFVLKMKSFALRYAVHDNRADAPPLSPFPSVRAQP
LSPRRVSQRHSLYVSPHKNSTACLTPNSYTYRINSSPSKELSDINRMIRQGSVSRKRAFT
MEGDVMMSSACDSPSKRACPENSPDVLLKRLQVVVSERQSH
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtccgattctgagtcgggcaggatggaggagagctcggttcgg
aggagcctggagactctgtgccaggaactgaacatggacgagcagacagcctcagaaaca
ctggagaacttcactgccatctggaacacatacaccctggagggggaggtggtgcactgg
ttggcctgctctctgtacgctgcctgcaggaagggctccactcccaccgtgggtaaagga
ctgatggagggaaactgcgtgtctctcaccaggatcctccgcaccgccaaactcagtctg
atccagttcttctctaagatgaggaagtgggccgacatgtcgagcctctctcaggacttc
cggctgcgcatggatcgactcgagaggaacttcgaggtctcgaccgtcatcttccgcaag
tttgagcccatcttcatggacatgtttcaaaacccgcaggggggggagccgcctcgacag
ccacgcagcaggaagcacaggaggttgccgtgtcacatcagcgatgtgttcaagttctgc
tggactctgtttgtctacacaaaaggtaacttccgtatgatcggagacgacctggtgaac
tcgtaccacctgctgctctgctgcctggacctggtgttcggaaacgctctgctctgcgcc
aacaggaaggacctcatcaaccccaccttcagaggcctgcctgctctgtaccgcgctgac
ggccacgtgtctccggaccagccccccccctgtgtgttggagcgtctctgtgagctgcac
gacggcctggtggtcgaggccaaggggatcaaacagcactacttcaaaccatacatccag
aaactgtaccagaaacagatcctgagaggaaacgaggataatttgaccgagctgttggac
cctcagagcttcatcgataacaacaaagccataaacagggagtatgaggagtacgttctg
acggtgggagatttcgacgagcgagtgtttctcggtgccgacgctgacgaggaaatcggg
acgccgaggaaaaccgtccaggaaacgtctgcgagccgaaacaacgctcagagtcagatg
aagcaacacgtggagaagtcggcctctctcgccccctccacccctctcacagggcgggta
tatctgaaggagaaggatctgctcgtcactcccgtttcctcggcaacgcagagtgtcagc
cggctgcagagcatggtgtccggtctgaggacggcgccgagcgaaaacatgctgcaggtc
ttcaggtcgtgctccagaaatcccaccgagtcgctgctggccagagtcaagaccctcgga
cagacgttcaaagaacattacaccaacgactcagaggacatgcccggatctcatatagat
tttgcagagaatcgtctgaagctggcagagatcctctactacaaagtcctggagaacgtc
atggtgcaggagaccaagcgcctgcctggaaaagacatgagtgtgttattggagcaggat
atgttccactgctctctgatggcgtgttgtctggaggtcgttctgttctcctacagctcc
cagaggaccttcccctggatcatcaacatcttcaaactcacacccttctacttctttaag
gtgatcgaggtgttcatccgctcggaggaaggcctctccagagacatggtgaagcacctg
aacctgatcgaggagcaggtgctcgacagcagggcctggagcgcagactctgccctctgg
agcgtcttgcaggctgcaggcaacaaagtgcccacagtggaggaggtgaatttctcctcc
agtctggacaccggttcaggtcctggctccagtggagttcagtctcacctcccgatgctc
gccctctctcccatcatccacccccgcatccgagagttcagatcgggcctgggcagcgca
cgcaaagacgtgcctccctccccgctgtcgctccatgacaggtacagctctccagcggca
ggcagcgctaagcggcgtctcttcggcgatgattctccggcgccgctgactgcgaccttg
agcccgatgtcgatgtcgtcgcccgccaaacgcctgacgttcacctccagcagcaccctg
aggatcggaggtcagggcggggggggcaccgtgctcagcatccctctgcaagggctgaat
aacgaccgcaccatcacactgatcccagttcagccatgtgattcctccggtacgatcacc
gctcagttcctgctcaccacctccccgagtcgcccccctcctccccctcccatgacctct
gaccccccggcgacaggaagcggacgcccgcggcgcaccggctccctcgcgctgttcttc
aggaaggtgtatcaccttgccagtgtgcgtctgagggatctgtgtgtgaagatggacgtg
tcgtcggagctgcgggggaaaatctggacgtgtttcgaacacgctttggttcactgcacg
gctctgatgaaggaccgacatctcgaccagctgatgctctgctgcgtgtacatcatatcc
aaaatcaccaaagagactcacaccttccacgacatcatgaagtgttaccgcggccaacca
caggccagcagccatgtgtaccgcagtgtgttactgcgtcacactctcagagagcaggtg
acggacgagaacatggaggtggatcctgtctcaggaggagaatcggcagagaagaccaat
caggcgtcaggagaagtcaacgccgaccaatcaggagaggaggaacgcggtgacctcatc
cagttctacaacagcgtcttcgtcctgaagatgaagagcttcgcgctgagatacgccgtc
catgataaccgggcggacgccccccccctctctccgttcccctcggtccgcgctcagcct
ctctccccccgcagggtttctcagagacactcgctctacgtttctcctcacaagaactct
acagcctgcctcacaccgaactcctacacatacaggatcaacagcagcccctccaaggag
ttgtcggacattaaccggatgattcgtcaggggtcggtcagcaggaagagagccttcacc
atggagggcgacgtgatgatgtcatcagcgtgcgactcccccagtaagagggcgtgtccg
gagaacagccctgacgtcctgctgaagcgcctgcaggtcgtcgtgtccgagcgacagagt
cactaa
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