Trematomus bernacchii (emerald rockcod): 117486582
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Entry
117486582 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: sortilin-like
KO
K12388
sortilin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117486582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
117486582
NCBI-ProteinID:
XP_033990984
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MGRYEDAFGDEGGMWSQLLGQKSFSXESKVGHCSLLINMISVSGVLALGLFWSALGTEGD
NLSGLRRLQREFGSDEERHSLEKSELSKRSAGLNEQTCTALHGVESTLQNSTHSFTFKVS
TMGSLSLAWVGDGSGVLLVLTTFQVPLFMMRFGQSNLYKSEDYGKTFKDVTHLINHTFIQ
SEFGFAISPDHSGKVILTGDVSDVGGFKLFRSQDFGLTFVPTDLPFEPLIQMLYNPGDCN
TLVTLSIMLDLWLSEDFGATWRKIHDSVCLVRWGPKNSIYFTTNYNGSCKDKGMLELKKT
ADYGRSFQTIATRVFSFVLGGRFVFASIMTGKGTQRKIHVSVDGGKVWNMAQLPTVNHEQ
FYSILASNQDMIFMHVDDPGDSGVGTIYVSDDRGAVFSKSLERHLYTTTGSETDFTAISS
LRGVYMTSVLSEDGAMETVITFDQGAKWQTLRRPQNSHCDTETSTNRPNRCRLLIHAAYS
ITMMMNVPMLPLSQSSAVGIILAHGSVGDEVSSLSPDVYVSDDGGYSWMLALRGPHHYAI
MDSGGLLVAVEQTNAPVNQIKFSTDEGQCWHTYNFTSDPLHFSGMDSEPGSRSMNVSLWG
YRNDFSKWVVITIDFRKILTRDCTEGDYVQWLAHSADPSGSHDGCVLGYKETFLRLRKDS
VCWNGRDYAITKKLSPCPCTIEDYHCDFGYYRPENSSECVEQEELKGHPLEFCLNGTTEQ
LQTSGYRKVPGDQCEGGFQPDRKETDLGRMCTSNVLSPNSLTEDSSPNTAVIVMVVIAML
LSSAVAGVWLVKKYVCGGRFLVHRYSVMRENVEADKIEGVDDIDTHYMETGKAQYNEDSD
QDLLE
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttatgaagatgcatttggtgatgaggggggcatgtggagccaactgttggga
cagaaaagcttctcgnncgagtccaaagttgggcactgcagtcttcttataaacatgatc
tccgtgtctggcgttttggcgctcggactgttttggtctgctctgggcactgagggagac
aacttatcaggtttgaggaggctacagagggagtttggcagtgatgaagagcgacatagt
ttagagaagtcggagctctcgaaacgcagcgctggactgaatgaacagacatgtacagcc
ctgcatggagtagagtcaaccctgcagaacagcacccactctttcaccttcaaagtgagc
accatgggttcactgtcactggcctgggtgggagacggttccggggtcctgctggtgttg
accacattccaggtgccgttgttcatgatgcggtttggccagtccaatctctacaagagt
gaagactatgggaagacgttcaaagatgtgacgcacctgatcaaccacaccttcatccag
agcgagttcggcttcgccatcagtcctgaccactctggcaaggtgattctcactggagat
gtgtcagacgtcggggggtttaaactgtttcgctcccaggactttggcttgacctttgtt
ccaaccgacctgccgtttgagcccctcattcagatgctgtacaaccccggagactgcaac
acacttgtgacgctcagtatcatgttggacctgtggctgtcggaggactttggcgccacc
tggaggaaaatccatgacagtgtttgtttggtcagatggggtccaaaaaacagcatctac
tttacaacaaactacaatggatcatgcaaagataaaggaatgctggagttaaagaagaca
gcagattatggtcgaagtttccaaaccattgcaaccagagttttctccttcgtactgggg
gggcgctttgtttttgcctccatcatgactggcaaggggacacagcgtaagatccacgtg
tcggtggacggaggtaaagtgtggaacatggctcagcttcctacagtcaaccacgagcag
ttctactccatcctggcatccaatcaggacatgatattcatgcacgtggacgaccctgga
gactcaggtgttggaaccatctatgtgtcagatgacagaggagctgttttctccaaatct
ctggagcgccatctttacacgaccacaggaagcgaaaccgacttcaccgccatctcttca
ctcaggggcgtctacatgaccagcgttctctcagaggatggtgcaatggagacagtgatc
acctttgaccagggagcaaaatggcagacgctgcgcagaccacagaacagccactgtgac
accgagacctcgaccaacaggcctaacagatgcagactcctcatccacgcagcctacagc
atcaccatgatgatgaacgtccccatgctgcctctctcacaatccagtgctgtaggcatc
attcttgcccatggcagtgttggggatgaagtgtcctctctctcacctgatgtgtacgtg
tctgatgacgggggctactcctggatgttggctctcagaggcccccaccattatgctata
atggactctggggggctgctggtggctgtggagcaaaccaacgctcctgtcaaccagata
aagttttccacagatgaggggcagtgttggcatacgtataacttcaccagcgacccgctc
cacttcagcggcatggacagtgagcccggctcccgctccatgaacgtcagcctgtggggt
tacaggaacgacttcagcaaatgggtggtgatcaccatagacttcaggaagatcctcacc
agagactgcactgagggggactatgtgcagtggctggctcactctgcagaccccagtgga
tcacatgatggctgtgtgctgggctataaggaaaccttcctacgcctgaggaaagactct
gtctgctggaacgggagggactatgccatcactaagaagctgtccccctgtccgtgtaca
atagaggattatcactgtgactttggatattaccggccagagaacagctcagagtgtgtg
gagcaggaggagctgaagggtcaccctctggagttttgtttaaatgggaccaccgaacag
cttcagaccagcggctaccggaaggttccaggagaccagtgtgagggaggttttcagccc
gacaggaaggagacagacctggggaggatgtgcaccagcaacgtcctttctccaaactct
ctgactgaagacagttcaccgaacactgctgtcatagtgatggttgtcatagcgatgctt
ctgtcgagtgctgttgcaggcgtttggctggttaagaaatatgtctgcggaggacggttc
ctcgtgcatcgatactctgtcatgagagagaatgttgaggctgataaaatagaaggagtc
gatgatattgacacacactacatggagacaggaaaagcacagtacaatgaagactcagat
caggacctgttagaataa
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