Trematomus bernacchii (emerald rockcod): 117486632
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Entry
117486632 CDS
T09643
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
tben04210
Apoptosis
tben04217
Necroptosis
tben04218
Cellular senescence
tben04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117486632
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117486632
04217 Necroptosis
117486632
04218 Cellular senescence
117486632
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117486632
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117486632
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
117486632
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C2: calpain family
117486632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
EF-hand_7
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
117486632
NCBI-ProteinID:
XP_033991025
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MPSPGVCVNIINARHLKDDNGIVTNPQKFLDQDFEQLKQYCMIKRVRYIDGMFPPDARSI
GPGVLTPSKLNKVVWLRPYKMVRNPCFEVDGVSRFDFGQGILGNCWFLASIGALTFQPSI
LKQVVPLEQRFDEEYCGIFHFRFWRFGRWVDVVIDDKLPTIDGRLVFVHSNDPTEFWPAL
MEKAYAKVCGSYSDMNAGTPAEALVDFTGGVHMCIDLTKSPPTLWELMGRAVQSKSLMGC
GTPQGATSDNTVLPNGIVQGHAYAVTGVKQILSRGQPVNLVRLWNPWCHREWIGDWSDKS
PLWQTVSPQDREVCLSVADDGEFWMTLEDFCRFYSDLDICCPSPAFLDGNTSCHWKTSRC
EGRWVAGTTAGGCANNSDSFWTNPQYRVKIEEVLSECSGKQGEKNMLLSLMQKPDKRNRR
LVQNLGIGFYVFEVTEEYKSRSGKFPASFFNKNRPAYQTTKYEMAREVMGFLMLKPGEYL
IVPSTFNPNETATFILTILSKAETHVHENSGGHYHEQQEVMDKGTENEENDEKKKHFFRQ
YSDKYEEVDAEQLQRLLNEQILKGDLKSGGFSIDACRGMVALMDTSVTGKLNGEEFVRLW
KKVVAYKDIFFRTDVSKTGTLSLSELRNAIMASGKRASDDMLNLLALRYGASSGHITLES
FISMVLRFDCMSQIFSQLSNGMNMTLRESEVIKVIQRCFFKCVQVVIIQPGTAIDLNKRK
DICFWQKKNQFQYHSPNMLF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgccaggtgtgtgtgtgaacatcatcaacgcccgtcacctgaaagatgataat
gggatcgtcactaaccctcagaagtttctggaccaagactttgagcagctgaaacagtac
tgtatgattaaacgggtaaggtacatcgacggcatgttcccccctgacgcgaggtccatc
gggcctggggtactgaccccttctaagctgaataaagtggtgtggctgagaccatataaa
atggttcgcaatccttgttttgaagttgatggggtctccaggtttgactttggtcaaggc
atacttggaaactgctggtttcttgcatcaatcggagctctgacgttccagccctccatc
cttaagcaggtcgttcctcttgaacagagatttgacgaggagtactgcgggatattccac
ttcaggttctggaggtttggaagatgggttgatgttgtcattgatgacaaactaccaact
attgatggcagactggtctttgttcactccaacgacccaactgagttctggcctgctttg
atggagaaagcctatgccaaagtgtgcggttcctactcggacatgaatgccggaactcct
gccgaggctttagtggacttcaccggtggagttcacatgtgtattgatctgacaaaatct
cccccaactctgtgggagttgatgggcagagctgtccaatccaagtcactgatgggctgt
ggtacacctcagggggccacatctgacaacacggttttaccaaatggaatcgtccaagga
catgcctacgctgtcacaggtgtgaaacagattctgagccgagggcaaccggtaaacctg
gtgcgtttgtggaacccctggtgccatcgggagtggatcggagactggagtgacaagtct
cctttgtggcagaccgtgagtcctcaagatcgtgaagtgtgtctttctgtggctgatgat
ggggagttttggatgaccctggaagacttctgcaggttctatagtgatctggacatctgc
tgcccgtctcccgccttccttgatggaaatacttcttgccactggaagacctcccgctgt
gagggccgatgggttgcaggaacaactgccggaggatgcgcgaataatagtgacagtttc
tggactaatccgcagtaccgggtcaagattgaggaagtactcagtgaatgttctgggaaa
cagggtgagaagaacatgctgttgtctctgatgcaaaagcctgacaagaggaacagacgt
ctggtccaaaatctcggcattggattctatgtatttgaggtgactgaagaatacaagtca
cgtagtggaaagttcccagcctcgttcttcaacaagaacagacctgcctaccaaactaca
aaatacgaaatggcacgtgaggtgatggggttcctgatgctaaagcctggcgagtacctg
atcgtaccgtccacctttaatcccaatgagactgccaccttcatcctgaccatcctctcc
aaggcagagacccacgtccatgagaattcgggtggccattaccacgaacaacaggaagtg
atggacaaaggaactgaaaatgaggagaacgacgaaaagaagaaacactttttccgtcaa
tactctgacaagtacgaagaagtggatgccgagcagctccagaggcttctaaatgaacaa
atcctgaaaggagacttgaaatcaggaggcttcagcattgatgcctgtcgcggcatggtt
gctctgatggatacgtcagtcactggcaaactcaatggagaggaatttgttcgtctctgg
aagaaggtcgtcgcgtacaaggacattttcttccgcactgatgtttcaaagacgggaaca
ctgtcattgagtgagctgaggaatgctatcatggcgtcaggaaagagggccagcgatgac
atgctgaacttgttggctctgcgctacggtgcctcctctggacacatcaccctggagagc
ttcatcagtatggtgctgcgcttcgactgcatgagccaaatcttcagccagttgtcaaat
ggaatgaacatgactcttcgtgaatcagaggtaataaaggttattcagaggtgtttcttc
aaatgtgttcaggttgtaatcattcaacccggcacagctattgacttaaacaaaaggaag
gacatttgtttttggcaaaagaaaaatcagtttcaataccattcccctaatatgttgttc
tag
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integrated database retrieval system
