Trematomus bernacchii (emerald rockcod): 117486642
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Entry
117486642 CDS
T09643
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117486642
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117486642
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
SALM family
117486642
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117486642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
fn3
LRR_9
Ig_2
LRR_5
LRRCT
Sp38
LRR_14
GP79
Motif
Other DBs
NCBI-GeneID:
117486642
NCBI-ProteinID:
XP_033991039
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MDKVVISLLLLGTAVTMVHACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLG
GNFILKVTTLDFANMTGLVDLTLSRNTISTIQPFSFIDLETLRSLHLDSNRLTELGPDDL
RGLANLQHLILNNNQLNQIADTGFDDSLSTMEDLDLSYNNLRNVPWEAIRKMVNLHQISL
DHNLILYISEGTFTDLDKLARLDLTSNRLQKLPPDPIFGRSQSNVVMSTPYEPPLSLSFG
GNPLHCNCEVLWLRRLERDDDMETCASPNSLKGRYFWSVREEEFVCEPPLITQHTHKLLV
LEGQTASLRCKAVGDPMPTVHWVAPDDRLISNSSRATVYENGTLDILITTSNDYGIFTCI
AANAAGESTASIELSIIQLPHLSNGTNRTTQSKSGLSDITSSTKISKGEPKPLPEKVVSA
SEVTAISALVKWTVSKSTPKVKMYQLQYNCSEDEVLIYRMIPTTNRAFIVTNLVPGMQYD
LCVLAIWDDTATTLTATNIVGCVQFITTEDYPQCQSLHSGFLGGTMILVIGGIIVATLLV
FIIILMVRYKVTSGIQTDKLPAVSNTYSQTNGGLNRFSGAQPQVKSTVVVMREEMVEFKC
GSLQSSLSSSSSSSNSLDSKIGRGAGDHYSMQSSECSTLPSSKFRRHGTKARPNLDHLLG
AFTSLELRGVARDHHRASGPTTSSNAMITVAMVPPSDKQPLLGRAESTTMLERLLGMPQE
GKPRRSHSFDMGHVGAAQCRGSHPRRISNIWTKRSLSVNGILLQYDDSEDEKPAFESAEW
VMESTV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggtcatcagtctcctgcttctgggaaccgcagtaacgatggtccatgca
tgtccaaaatactgtgtctgccagaacctctcagagtctctagggactctgtgcccctcc
aaaggcttgctctttgtcccgccagacattgaccggcgaactgtggagctccggctgggc
ggaaacttcatcctcaaggtcaccaccctggactttgccaacatgacgggtcttgttgat
ctcaccttgtcccgtaacaccatcagcaccatccagcctttctctttcatcgacctggag
accctaagatcccttcacctcgacagtaacaggttgactgagctgggacccgacgacctc
cgaggactggccaacctgcagcacctgatcctcaacaacaaccagctgaatcagatcgct
gacacaggctttgacgactcgttatcgacaatggaagatctggatttgtcgtataacaac
ttgcgcaatgtgccttgggaagccatccgcaagatggttaacctccatcagataagtctg
gatcataacctcatattgtacatttctgaggggacttttacagatctggataaactggcc
cgcttggatctcacctccaaccgtctccagaagctccctccagaccccatctttgggcgc
tcacaaagcaatgtagtgatgagcactccttatgaacctccgctctctctaagctttgga
ggaaatccattgcactgcaactgtgaagtgctttggcttcgaaggctagagcgggacgat
gatatggaaacttgtgcatctcctaatagtctaaaggggcgctacttttggtctgttcgt
gaggaggagtttgtttgcgagccccctctgatcacgcaacacacacataaattactagtg
cttgaaggccaaacggctagcctgcgctgcaaagcagtcggggatccgatgccaactgtg
cattgggttgctcctgatgatcgtttgatcagcaactcctcccgagcaacagtatacgaa
aatggcaccctggacattttaatcaccacatccaatgattacgggatttttacctgcata
gctgccaacgctgcaggggaatctacggcctccattgaactgtcaatcattcaactcccc
catctgagtaatggtacaaaccgtaccacacagtccaagtcagggctttcagatataacc
agttctaccaagatcagtaaaggggagcctaaacctctaccagagaaggtggtttctgca
tcagaagtgactgccatctctgcactggtcaagtggactgttagcaaatcaactccaaag
gtcaaaatgtatcagcttcagtacaattgttctgaggatgaagtccttatttacaggatg
attcccacgactaacagagccttcatagtcacaaatcttgtcccaggaatgcagtatgac
ttgtgtgtcttggccatctgggatgacaccgccaccaccctaactgccaccaacatcgtc
ggctgtgtccagttcataaccacggaggactacccgcagtgccagtctctccacagtggc
ttcctgggtggcaccatgatcctagtcatcggcggcatcatcgtggccacgctgctggtg
ttcatcatcatcctcatggtgcggtacaaggtgacaagtggcatccagaccgataaacta
cctgctgtgagcaacacatactcgcagaccaacggggggttgaaccggttcagcggtgcc
cagccgcaggtcaaatccacagtggtggtcatgcgtgaggaaatggtagagttcaagtgt
ggatccctccagagcagtctatcttcatcatcatcatcttctaactcattagacagcaaa
ataggaaggggggctggcgaccactacagcatgcagagcagtgaatgcagcaccttgccc
agcagcaagttcaggaggcatggcaccaaagcacggccaaacctggaccaccttttaggg
gccttcacctcactggagctgcggggggtagcaagggaccaccaccgggcttctggcccc
actacctcttccaatgctatgatcacggtagcaatggtacccccgtctgacaaacaaccc
ctgctcggtagggccgaatcaaccaccatgctggaacgtctgttagggatgccccaagag
ggtaagcccaggaggagccactcgtttgacatgggtcacgtgggggctgcacagtgtcgc
ggcagccaccctcgcagaatcagtaacatctggactaagcgcagtctgtctgttaacggc
attctgctgcagtacgatgacagtgaggacgagaaacctgctttcgaaagcgcggagtgg
gtgatggaaagcacagtttga
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