Trematomus bernacchii (emerald rockcod): 117486644
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Entry
117486644 CDS
T09643
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117486644 (lingo2b)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117486644 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
Ig_2
ig
LRR_9
LRR_EndoS
LRR_Zer-1
V-set
LRRNT
Ig_6
Sp38
Motif
Other DBs
NCBI-GeneID:
117486644
NCBI-ProteinID:
XP_033991042
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MTEGNAGKRDMRHPALNHCHLFLGGALLLLLASPALSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRIITPDNFSSFQQLEDLDLSDNLISVVEPGSFRSQLALRSL
NFRSNLIQLVPVGVLSGLTNLTRLDLSHNRLVVLLDHAFQDLRRMASLEVGDNELVFISQ
RAFTGLLGLQSLTLERSNLTVVPTDALAHLHSLVELRLRYLSISFLKPFSFKRLSRLRRL
EIDYWPWLETLPPLSLHGLNLTMLCITNTNLSAFPGAALRNLPYLTHLNLSYSRIQHIHH
GELGPLPHLVELHLQGAQLISIEPFAFVGLKSLQLLDVSQNRLDSLESGVFASPDSLQRL
CLGGNPLMCDCRLLWLLNSHKPPSLQILDVQPECSGPEHLLGKPLRDLKEPLVSRYMTCT
KPQIGPNTTQLLMADEGQPARLNCRAEGAPRPSVVWISPHRRYITTKSIGRVEVQPDGTL
EIKAVELHDSGVYLCIASNPAGNASLSASLAVKSLGLADRSHYTNRSSNYLSDSNSTWGN
GTVLYNMTVPIDLKTIIISTAMGCLSFLGVVIFCFLILFIWSRGKGRHKSNFDIEYVPRK
SNGAAAEVTETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggcaacgcgggtaaaagagacatgcgacacccagccctgaaccactgccac
ctcttcctgggcggggccttgctgcttctgctggccagcccggctctgagctgccccgcc
cgatgtgagtgctctgcccaaagcaagtcagttagttgccaccgaaagcgtctgcccacc
atccctgaaggcatccccattgagacgcgcgtcctagacctcagtaagaacaagctacgt
atcatcacgccggacaacttctcctcattccagcagctggaggacctggacctaagcgac
aatcttatcagcgtggtcgagcccggctcatttcgttcacagcttgctctccgctcgctc
aactttcgcagtaatttaattcagctggttcctgtgggcgtgttgtcaggcctgaccaac
ctcacccgccttgacctcagccacaaccgcctggtggttcttctggatcatgcctttcaa
gatctgcgcaggatggcgtccctagaggtgggtgacaacgaactggttttcatctctcag
cgggcctttacaggcttacttggactccaaagtctgaccctggaacgttccaatctgaca
gtggttcctactgatgcactggcacatctgcacagcctggttgaactgcgcttgcgctac
ttgagcattagttttctaaagcctttttcttttaagaggttatcacggctccgccgacta
gagattgattactggccctggctggaaacactgcctcccctttcactgcatggcctcaac
ctcacaatgttgtgcataaccaacactaacctgtctgccttccccggcgcggcactgcgc
aacctgccctacctcacacatcttaacctgtcctacagccgcatccagcacatccatcat
ggagagctgggcccactaccacacctggtggagctccacctccaaggggctcagctgatt
tctattgagccctttgcatttgtgggccttaaatctttgcaacttctggatgtgtcacag
aaccgcctggactctctggagagtggagtgtttgcctcgccagacagcctccagaggctc
tgtctgggaggaaacccattaatgtgcgactgcagattgctttggctcctcaatagccat
aagcccccctctctgcagattctggatgtgcagccagagtgcagcggccctgagcatctc
ctggggaaacctctccgtgacctcaaggagcctctggtctccagatacatgacctgcacc
aaaccacagattggacccaacacgacccagctgctgatggctgatgagggtcagcctgcc
cgcctgaactgcagggcagagggagcgcctcggccctcggtggtatggatttcacctcac
agacgctacatcacaaccaagagcattggcagggtggaagtccaaccagatggtaccctg
gagatcaaggcagtggaactgcatgacagcggggtgtacttgtgtattgccagtaaccct
gctggcaatgctagcctgtcggcctctttagctgtgaagagcctgggccttgcggacaga
tctcactatactaacaggagctcaaactatctgtcagactctaacagcacatgggggaat
gggacagtactgtacaacatgacagtccctatagaccttaagactatcattatatctaca
gcgatgggctgcctgtctttcttaggtgtggtcatcttctgcttcctgattctgtttatc
tggagtcgaggaaaaggacgacataagagcaactttgatatagagtatgtccctcgcaag
tcaaacggggcagcagcagaagtgacagaaacaagtggcccacgacgggtaaacatgaaa
atgatttga
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