Trematomus bernacchii (emerald rockcod): 117486734
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Entry
117486734 CDS
T09643
Symbol
gabra2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117486734 (gabra2a)
04082 Neuroactive ligand signaling
117486734 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117486734 (gabra2a)
Ion channels [BR:
tben04040
]
Ligand-gated channels
GABA-A
117486734 (gabra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5522
Motif
Other DBs
NCBI-GeneID:
117486734
NCBI-ProteinID:
XP_033991151
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRGQWSPYFTSVLVSLTILWQTRSGVDSNSTRNVNITTFTKILDSLLDGYDNRLRPGLGD
RVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFHGPMNILPLNNLMASKIWT
PDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSHSCPLK
FGSYAYTKTEVTYIWTHNATHSVDVAAERSRLNQYDLVGQTAGNQTIKSSTGEYTVMTAQ
FHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNS
LPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKTIINEKKKEAAVMKKN
NAYAVAVANYAPNITKDSTLPTISKCGLTDNNKTAAETKPEHNKKTFNSVSKIDRISRIL
FPVLFSSFNLVYWATYLNREPVIKYMDPAK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagaggacaatggagcccatatttcacgtccgtgctggtgtctttgaccattctgtgg
cagacacggtccggagtagattccaattcaacacgtaacgtcaacatcacaacgttcacc
aagatcctggacagtctgctggatggatacgacaacagactgagacccggcctgggagac
agagtaacggaagtgaagactgacatctatgtaaccagttttggtccagtttctgacacc
gatatggagtacaccattgatgttttcttccgccagagttggaaggatgagcgattaaag
ttccacggaccgatgaacattctgcctctaaacaacctgatggccagtaagatctggacg
cctgacacgttcttccacaacggcaagaaatctgtcgcccacaacatgaccatgcccaac
aagctgctgaggatcatggaggacggaaccttgctctacactatgaggttaacggttcaa
gctgagtgccccatgcaccttgaggacttcccaatggactcccactcctgtcctctgaag
tttggcagctatgcctacactaagacagaggtgacttacatctggactcataatgccacc
cactcagtggacgtggcggctgaaagatccagactcaaccagtacgacttggtgggccag
acggcgggcaatcagaccattaaatccagcactggtgagtacacggtgatgacggctcaa
ttccacctgaagaggaagatcggatactttgtgatccagacgtatctgccctgcatcatg
accgtcatcctgtctcaggtctccttctggctcaacagagagtccgtgcctgccaggacg
gtctttggtgtaactacagtcctcacaatgaccaccctgagtatcagtgcccgtaactca
ctgccgaaggtggcctatgctacagccatggactggttcatcgccgtctgctatgccttc
gtcttctctgcactcattgaatttgctaccgtcaactacttcaccaagcgggggtgggcc
tgggacgggaagaccatcatcaacgagaagaaaaaggaagcagcagtgatgaagaagaac
aacgcctatgctgtagctgtggctaactacgctcccaacatcacaaaagactctacgctg
cccaccatctcaaagtgcggtctgaccgataacaacaagaccgcagcggaaacaaagcct
gagcacaacaagaagaccttcaacagcgtcagcaagatcgaccgcatctcccgcatcctg
ttccccgttctgttctcaagctttaacctggtctactgggccacctacctgaacagagaa
ccagtcattaaatacatggaccctgccaaatga
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