Trematomus bernacchii (emerald rockcod): 117486792
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Entry
117486792 CDS
T09643
Symbol
lrfn5a
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117486792 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117486792 (lrfn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_1
LRR_4
ig
Ig_2
LRR_9
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
Sp38
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
117486792
NCBI-ProteinID:
XP_033991233
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFIPPNIDRHTVELRLA
DNFITTVKRKDFANMTRLVDLTLSRNTISFITSHAFADMENLRALHLNSNRLTRIANDTF
NGMSKLHHLILNNNQLVVIHQEAFNDLLALEELDLSYNNLDSIPWEAIQRMISLHTLSLD
HNMLDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTATSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQQLSGRYFWSVPEEEFLCEPPLITRYSHKMRVL
EGQRVTLRCKARGDPEPVIHWISPEGKLVSNSSRTLVYNNGTLDILISTVKDTGSFTCIS
SNPAGENHQTIELIIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDIITSLTATRVVGCVQFSTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGESGKGVSLSMTNVHSQTNGQQSQGCTVTPSSSKHGSIGLD
DLSGGSKKRGGKDTITQSSDSSLPDCSTTTSVLSQSWAARSPTAGAEDREKGGEEKAKGG
VSSPNGTTGTLPKPKRKPAPGKPGGSSTSAPPENPPSPSPRPPPSPYSTPSSVLLPSTPL
ENLNTNRNNSTSLNQTPPPYVPSPYPTLPAKPSPVPSIRFSETPILRRAPRGASASSKYQ
TLPAEELGRSRARRRNSLCDGGSKTHPAHQGAAGPPKIGRIMRNKRSQSMSGILLPKDGD
GESDKGRCDSDWILESTV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctgtgtgtgatgctggcagttgccatggcagtgcgggcacagatc
tgcccgaagcgttgcgtgtgtcagatcctgtcacccaacctggcaaccctctgcgccaag
aaaggtcttctgttcatcccgcccaacatcgacaggcacacggtggagctccggctggcc
gacaactttatcacaactgtgaagaggaaagatttcgcaaacatgacgcggctcgtagac
ctaacattatccagaaacaccatctccttcatcacatctcacgcctttgccgatatggag
aacctcagagctttacaccttaacagtaaccggctgacgaggatagccaatgatacgttc
aacgggatgtcgaagctccaccacctgatcctgaacaacaaccagctggtagttatccac
caggaagcgttcaacgacctgctggcactggaagagttggacctgagctacaataacctg
gactctattccttgggaggccatccagagaatgattagcctccatacgttgagtttagac
cacaacatgttggactacatcccagagggaacattttccctgctacagaaactcaaccgg
ctggacgtcacctctaataaactccaaaagctgccaccagacccactttttcaacgagca
caggttctggcaacatcagggatcatgactgccacttcttttgcgttgtcattcgggggg
aaccctctccactgtaactgtgagctgctgtggctgcggaggttgaaccgagaagacgac
ctggagacgtgcgcttcacctcaacaactctctgggcgctacttctggtctgtccctgag
gaggagttcctctgcgaacctccactcatcacaagatactcccacaagatgagggtgctt
gaaggccagagagttactctcaggtgtaaggccagaggtgacccggagccagtcatccac
tggatctctcccgagggcaaactggtgtctaactcctccagaacgttggtctacaacaac
gggactctggacatcctcatcagcacggtgaaagacaccggctccttcacctgcatctcc
tccaacccggccggggaaaaccaccaaacaatagagctcattataataaagctcccccac
atctccaacaacaccaacaacatacaggagcccgacccgggatcctcagacatctccacg
tcgactcgaggaggggccaacgggagcaacgtgacgggtgacgtgaagggcggggtggac
aagagggtggtgacagccgaggccacgtcatcaacggcgctgatcaagttcaacttccag
aggaatattccgggcatcaggatgttccagatacagtacaatgggagccaagatgactcg
ctggtttacagaatgatccccccatccagcaagaacttcctggtcaacaacctggcggcg
gggacgcagtacgacctctgcgtgctggccatctatgatgacatcatcacctccctgacg
gccacgcgcgtggtgggctgcgttcagttctccaccgagtcggagtacatgaggtgtcat
ttcatgcagtctcagttcctcggcggcaccatgatcatcatcatcggagggataatcgta
gcctcggtgctcgtcttcatcatcatcctgatgatacgctacaaggtgtgtaaccccggt
gagagcggtaaaggcgtctccttgtcgatgaccaacgttcactctcagaccaacgggcag
cagtctcagggatgcaccgtcacccccagctcctccaaacacggctccatcgggttggac
gacctctctggaggctcaaagaagagggggggcaaggataccataactcagtcgtccgac
tcctccctgcccgactgctccaccaccacctcggtcctcagccagtcctgggcggccagg
agcccgacagccggagccgaggaccgggagaaagggggtgaggagaaggccaagggtggg
gtctcgtcgcccaacggcaccaccggcaccctccccaagccgaagcgtaaacctgctcca
ggaaagccgggcggttccagcacctcggccccccctgaaaacccaccatccccctcccct
cgccctcctccctcgccatactccaccccctcctccgttctcttgccctccacccctctg
gagaacctcaacaccaaccgcaacaactccacctctctcaaccaaaccccgcctccttac
gtcccttcgccttaccccaccctgccggccaaaccgagccccgtcccctccatccggttc
agtgagacccccatcctgcgccgggccccccgtggcgcctccgcctccagcaagtaccag
actctccctgcggaggagctggggaggagcagggcgaggaggaggaactcgctctgtgac
ggaggctcaaagactcaccccgcccatcagggggcagcaggaccacccaaaatagggcgg
ataatgcggaacaaaaggagccaatcaatgagcgggattctactccccaaagacggggac
ggagaatcggacaaagggcggtgcgactcggactggatcctagagagcaccgtttga
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