Trematomus bernacchii (emerald rockcod): 117486809
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Entry
117486809 CDS
T09643
Name
(RefSeq) CLIP-associating protein 1-A-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117486809
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117486809
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117486809
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117486809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Cnd1
TOR1L1_N
Sec7-like_HUS
Adaptin_N
HEAT_DAAF5
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
117486809
NCBI-ProteinID:
XP_033991255
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MTEEVQMEALLEQVLQKDLGVRIKVGPEVTEVILSEQRSPDLEQDQSLVDRVVDAVASSW
VNSSNFKVVLLGMDILSALVSRLQERFRTQVGTVLPSLMDRLGDAKDQVREQDQALLLKI
MDQAANPQFVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICNLLGD
PTSQVRDGAMNCLIEIYRHVGERVRMDLGKKGLPQSRLNVIFSRFDEVQRSGNMVSPLSD
KAFEDDDSGDGGRSSSSSRGGKKTLSMGSFRRTGSSSKSAGRDGSAAGAVDDEDFIQAFE
DVPTVQIHSNREVEENMTKIRDVLSDDKKDWELRVAALKKVRSLLLAGASDFDVFPQQLR
LMEAAFKLSAKDLRSQVVREACLTMGHLSLVLGSRFDHAAEAIMPILVTLVSNSAKIMAS
SGTAAIRLILKHTHYPRLIPVITSNCICKSVAVRRRCFEFLEQLLQEWQSSSLERHGTVL
METIKKGIHDADAEARSVARKCYWSYQAHFKREADQLFQSLEASYQKALQAHQRGGENSV
TSLPASDRSSSSSQESLSRPPPVKNTFGSGSTRTKASHGRPPVPAPPPSLQRSRSDVDVN
AASSSARRMPAVPAAFSSASTLPPGSYASLDGCSSVSADGRVRTRKMTSGNASCVTDSRG
RSRGKISSHSQPGSRSGSPGRLLSSTYGPRTSRLNAGPPLAGSIPPGLIDLRPRGHRSQG
CSRETSPSRAAKAQSRIPRPSMSQGCSRETSRDTSPARGFSPLDRLAHQARMSASVNAMK
VLNTGSEVEEAVADALLLGDSRNKRRPVRRRFESPGIYSDDDANSDASSDRSFSSRNGSQ
SFLRQTEDVAEILNHCASANWTERKEGLLGLQNLLRGQRTLSRVELKRLCEIFTRMFADP
HSKVFSMFLETLVDFVLLHRDDLQDWIFVLLTQLLKKMGAELLGSVQAKVQRALDVTRES
FPYETQFNILMRFIVDQTQTPNLKVKVAILRYVQALSQLMDPADFSNSSETRLAVSRIIT
WTTEPKSSDVRKTLHSWGGDEVSGPPSTVGGTHLEDRCKQAAQVVLICLFELNTPEFTML
LGALPKTFQEGTTRLLHNHLRSSMVSSGSPAGRTPPRPLTSPTNCSPGGLSPSLLDLDSE
ILNAEEIFSSLRGVTEAIQNFSFRSQEELTEPRRDGKGGVGLSPDSEVLGGGRTALDNKT
SLLNTPPPRSFCGPRFRDYNPFNYCDSIGAMEDDGSRQESVENKMSPKSFPVVPAEQLQL
VGDLLKELSIGQAEERRGQEEKRRGLEERRGTLLELLKVSREDSMVVWEEHFKTMLLLLL
ETLGDKDHTIRALALRVLKEILRNQPGRFKNYAELTIMKTLEAHKDSHKEVVRAAEEAAS
TLASSLHPEQCIKVLCPIVQTADYPVNLAAIKVQTRAIERIAKDPLHLLLNDIIPGLLQG
YDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSTSSSSS
DISSY
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaggtgcagatggaggctctgctcgagcaggtgctgcagaaggacctgggg
gtcaggatcaaggtcggccccgaggtcacagaggtcatcctgtcggagcagaggagcccc
gacctggagcaggaccagagcctggtggaccgcgtggtggacgctgtggccagctcctgg
gtcaactccagcaacttcaaggtggttctgctggggatggacatcctgtcggcgctggtc
agcagactgcaggagaggttcaggacgcaggtcggcacagttctgccgagcctcatggac
cgcctaggagacgctaaagatcaggtgagggagcaggaccaggcgctgctgctgaagatc
atggaccaggctgccaaccctcagtttgtttgggagcgcatgatgggaggcttcaaacac
aagaacaaccgcaccagagagggcctctgcctctgcctcatctccaccctcaacgtgttt
ggatcccagagtctgacgctgagtaagatcgtccctcacatctgcaacctgctgggagac
cccaccagccaggtgcgcgacggagcgatgaactgcctgatcgagatttatcgacacgtc
ggagagcgagtgaggatggacctcgggaagaaaggcctgcctcagtcacggctgaacgtc
atcttcagcagatttgatgaagtgcagcggtcggggaacatggtgtctcctctgtccgac
aaagccttcgaagacgatgactcgggggacggcggccgctcctcttcctcgtccagagga
gggaagaagactctgagcatgggttccttcaggagaaccggatccagcagcaagtctgca
gggagggacggctctgcagctggagcggtggacgacgaggatttcatccaggccttcgag
gacgtccccacggtgcagatccactccaacagggaggtggaggagaacatgacgaagatc
cgggacgtcctgtctgacgataagaaggactgggagctccgggtggccgcgctgaagaag
gttcgctcgctgcttctggccggcgcttcagacttcgatgtgtttcctcagcagctgcgt
ctgatggaggcggcgttcaaactgtccgccaaggacctccgctcccaggtggtgagggag
gcctgcctcaccatgggccacctgtctctggtcctcgggagtcgtttcgatcacgctgcg
gaggccatcatgcccatcctcgtcactctggtctccaacagcgccaagatcatggcgtcc
tccggcacggccgccatccgcctcatcctcaaacacacacactacccgcgtctcatcccc
gtcatcaccagcaactgtatatgcaaatctgtggctgtcagacggcgctgctttgagttc
ctggagcagctgctgcaggagtggcagagcagctctctggagagacatgggacagtttta
atggagacgataaagaaagggatccacgatgcagacgcagaggctcgatccgtggccaga
aagtgctactggagttaccaggctcacttcaagcgggaggcggatcagttgttccagagt
ctggaggcgtcctatcagaaagctctgcaggcgcaccagagagggggggagaacagcgtg
acatcacttcctgccagcgaccgatcctcctcctcctcccaggagagcctcagtcgaccc
ccgcctgtaaaaaacacgtttggaagcggctcaacaagaaccaaagcctcccacggtcgc
cctccagtacccgcccctcccccctccctccagcgctctcgcagtgatgtggatgtgaac
gccgcctcgtcctccgcccgcaggatgcccgccgtgccggcagcctttagctccgcctcc
accctcccccccggatcctatgcctccctggacggctgctcgtctgtgagtgcagacggt
cgcgttcggacccggaaaatgacctcagggaacgcttcctgtgtgacggacagccggggg
cggagccgcgggaaaatctcatcccactctcagcccggcagcaggtcaggctctcccggg
cgtttgctgagctccacatacggcccacggacctctcggctgaacgctggcccccccctc
gccggcagcatcccccccggcctcattgacctccgaccccgaggccaccggagccagggc
tgcagccgagagaccagccccagccgggccgccaaagcccagagcaggatccctcgaccc
agcatgagtcagggctgcagccgagagaccagccgagacaccagccccgcccgggggttc
tcccccctggaccggctcgcccatcaggctcggatgtcggcgtccgttaacgccatgaag
gtcctgaacaccggcagcgaggtggaggaggccgtcgccgacgctctgctgttaggagac
tccaggaataagcgtcgtccggtccggagacggttcgagtccccggggatctactctgac
gacgacgctaacagcgacgcgtcctccgaccgctccttcagctccaggaacggatcgcag
agcttcctgaggcagacggaggacgtggcggagatcctgaaccactgcgccagcgccaac
tggaccgagaggaaggaggggctgctgggcctgcagaacctcctgagaggacagaggacg
ctcagccgggtggagctgaagagactttgtgagatcttcaccaggatgtttgcagaccct
cacagcaaggtgttcagcatgttcctggagaccctggtggacttcgtgctcctgcacaga
gacgatctgcaggactggatcttcgttctgctcactcagctgctgaagaagatgggggcg
gagctactgggctccgttcaggccaaagtgcagcgggcgctggacgtcaccagggagtcg
ttcccgtacgagacgcagttcaacatcctgatgcggttcatcgtggatcagacgcagacc
cccaacctgaaggtgaaggtggccatcctgcgctacgttcaggctctctctcagctgatg
gatcccgcagacttctctaactccagcgaaacacgactcgccgtctctcggatcatcacc
tggaccacggagcccaagagctccgacgtacgcaagaccctccacagctgggggggcgac
gaggtctcaggtccacccagcaccgtgggggggacacacctggaggacaggtgtaaacag
gctgctcaggtggtgctgatctgtctctttgagctgaacactcctgagttcaccatgctg
ctcggcgccctgcccaaaaccttccaggagggaacgaccagactgttacacaaccacctg
aggagcagcatggtgtcctctggttcccctgcaggccggaccccccctcgccccctcacc
tcccccacaaactgctccccggggggtctctctcccagcctgctggatctggacagtgag
atcttaaacgctgaggagatcttctcgtctctgcgaggcgtcactgaggccatccagaac
ttcagcttccgcagccaggaggagctgacggagccccggagggacggcaagggaggtgtt
ggattgtccccagactctgaggttttggggggggggcgcacggcgctggacaataagacg
tctctgctgaacacgccccccccacgctccttctgcggcccccgcttcagagactacaac
ccgttcaactactgcgacagcatcggagcgatggaggacgacggaagcagacaggagtct
gtggaaaacaagatgagccccaagagcttcccagtggtccccgcggagcagctgcagctg
gtgggggatcttctgaaggagctttctattggccaggcagaggagaggcgtggccaagag
gagaagaggcggggcctagaggagaggaggggcaccctgctggagctcctcaaagtgtcc
cgagaggacagtatggtggtctgggaggaacatttcaaaaccatgttgctgctgctgctg
gagacgctgggagacaaagaccacacgatccgggctctggctctccgagtcctgaaggag
atcctgaggaaccagccggggcgtttcaagaactacgcagagctcaccatcatgaagacg
ctggaggcgcacaaagactcacacaaggaggtggtgcgagcagcagaggaagcggcctcc
acgctggcgtcctccctgcacccggagcagtgcatcaaggtgctctgccccatcgtgcag
acggccgactaccccgtcaacctggccgccatcaaggtgcagacaagggccatcgaacgc
atcgccaaggaccctctgcacctgctgctgaacgacatcatcccgggactcctgcagggc
tacgacaacacggagagcagcgtgaggaaggcgagcgtcttctgcctcgtggccatttac
tctgtgatcggagaggagctgaagccgtacctcgcccagctcacagggagcaagatgaag
cttctcaacctgtacatcaagagagctcaaacctccacctccaccagcagcagctcctcc
gacatctcctcctactga
DBGET
integrated database retrieval system
